Guide to the Human Genome
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Name: EIF4ENIF1 Sequence: fasta or formatted (985aa) NCBI GI: 9789865
Description:

eukaryotic translation initiation factor 4E nuclear import factor 1

Referenced in:

Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         63           3
 C cysteine            0.6          6           1
 D aspartate           5.5         54           2
 E glutamate           6.9         68           3
 F phenylalanine       2.9         29           2
 G glycine             6.5         64           3
 H histidine           2.7         27           1
 I isoleucine          2.3         23           2
 K lysine              5.5         54           2
 L leucine            10.2        100           2
 M methionine          2.0         20           1
 N asparagine          2.4         24           2
 P proline             9.3         92           2
 Q glutamine           5.6         55           3
 R arginine            7.3         72           3
 S serine             11.9        117           4
 T threonine           4.3         42           2
 V valine              5.9         58           2
 W tryptophan          0.5          5           1
 Y tyrosine            1.2         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 4E nuclear i... 
TNRC18                0.012   trinucleotide repeat containing 18 
GLTSCR1               0.010   glioma tumor suppressor candidate region gene 1 [Ho...
APC2                  0.010   adenomatosis polyposis coli 2 
ANKRD17               0.010   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.010   ankyrin repeat domain protein 17 isoform b 
FLJ22184              0.010   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.010   PREDICTED: hypothetical protein FLJ22184 
LOC100128719          0.010   PREDICTED: hypothetical protein, partial 
LOC100128719          0.010   PREDICTED: hypothetical protein, partial 
LOC100134147          0.009   PREDICTED: hypothetical protein 
LEF1                  0.009   lymphoid enhancer-binding factor 1 isoform 3 
LEF1                  0.009   lymphoid enhancer-binding factor 1 isoform 2 
NHSL1                 0.009   NHS-like 1 
LEF1                  0.009   lymphoid enhancer-binding factor 1 isoform 1 
LOC100134663          0.009   PREDICTED: hypothetical protein, partial 
AMOT                  0.009   angiomotin isoform 1 
PRG4                  0.009   proteoglycan 4 isoform D 
PRG4                  0.009   proteoglycan 4 isoform C 
PRG4                  0.009   proteoglycan 4 isoform B 
PRG4                  0.009   proteoglycan 4 isoform A 
GNAS                  0.009   GNAS complex locus alex 
SRRM2                 0.009   splicing coactivator subunit SRm300 
WNK2                  0.008   WNK lysine deficient protein kinase 2 
LOC284297             0.008   hypothetical protein LOC284297 
MED25                 0.008   mediator complex subunit 25 
MUC6                  0.008   mucin 6, gastric 
PHC3                  0.007   polyhomeotic like 3 
KIAA0182              0.007   genetic suppressor element 1 isoform 1 
SRRM1                 0.007   serine/arginine repetitive matrix 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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