LEF1 36088

Name: LEF1	Sequence: fasta or formatted (399aa)		NCBI GI: 7705917
Description: lymphoid enhancer-binding factor 1 isoform 1		Referenced in: SOX Family T cells
Other entries for this name: alt prot [371aa] lymphoid enhancer-binding factor 1 isoform 2 alt prot [386aa] lymphoid enhancer-binding factor 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 22 2 C cysteine 0.5 2 1 D aspartate 4.5 18 2 E glutamate 6.8 27 3 F phenylalanine 1.8 7 1 G glycine 8.5 34 8 H histidine 5.5 22 2 I isoleucine 5.0 20 2 K lysine 6.3 25 4 L leucine 5.3 21 1 M methionine 3.8 15 2 N asparagine 3.3 13 2 P proline 12.0 48 2 Q glutamine 5.3 21 1 R arginine 4.5 18 2 S serine 9.0 36 2 T threonine 4.0 16 2 V valine 3.8 15 2 W tryptophan 0.8 3 1 Y tyrosine 4.0 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lymphoid enhancer-binding factor 1 isoform 1 LEF1 0.912 lymphoid enhancer-binding factor 1 isoform 2 LEF1 0.887 lymphoid enhancer-binding factor 1 isoform 3 TCF7L2 0.528 transcription factor 7-like 2 isoform 4 TCF7L2 0.523 transcription factor 7-like 2 isoform 6 TCF7L2 0.522 transcription factor 7-like 2 isoform 2 TCF7L2 0.522 transcription factor 7-like 2 isoform 5 TCF7L2 0.500 transcription factor 7-like 2 isoform 1 TCF7L1 0.456 HMG-box transcription factor TCF-3 TCF7L2 0.446 transcription factor 7-like 2 isoform 3 TCF7 0.325 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.256 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.256 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.255 transcription factor 7 (T-cell specific, HMG-box) 5... TCF7 0.255 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.255 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.252 transcription factor 7 (T-cell specific, HMG-box) 6... CIC 0.054 capicua homolog SOX6 0.048 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.048 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.048 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.048 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SOX30 0.044 SRY (sex determining region Y)-box 30 isoform b [Homo... SOX30 0.044 SRY (sex determining region Y)-box 30 isoform a [Hom... SOX5 0.042 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX5 0.042 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.042 SRY (sex determining region Y)-box 5 isoform a [Homo... SOX13 0.040 SRY-box 13 SOX11 0.039 SRY-box 11 SOX7 0.037 SRY-box 7 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.