Guide to the Human Genome
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Name: KIAA0182 Sequence: fasta or formatted (1217aa) NCBI GI: 44955926
Description:

genetic suppressor element 1 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {1113aa} genetic suppressor element 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3        101           3
 C cysteine            0.4          5           1
 D aspartate           3.3         40           2
 E glutamate          10.7        130           6
 F phenylalanine       2.1         26           1
 G glycine             4.5         55           2
 H histidine           3.8         46           2
 I isoleucine          1.7         21           2
 K lysine              5.1         62           3
 L leucine             9.8        119           2
 M methionine          1.5         18           1
 N asparagine          1.6         20           2
 P proline            11.6        141           6
 Q glutamine           5.5         67           3
 R arginine            8.8        107           4
 S serine             10.0        122           3
 T threonine           4.3         52           2
 V valine              4.5         55           2
 W tryptophan          0.5          6           1
 Y tyrosine            2.0         24           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   genetic suppressor element 1 isoform 1 
KIAA0182              0.919   genetic suppressor element 1 isoform 2 
RBM25                 0.029   RNA binding motif protein 25 
BAT2D1                0.028   HBxAg transactivated protein 2 
ZC3H13                0.027   zinc finger CCCH-type containing 13 
LOC100286959          0.025   PREDICTED: hypothetical protein XP_002343921 
SRRM1                 0.023   serine/arginine repetitive matrix 1 
LOC100131202          0.022   PREDICTED: hypothetical protein 
ZC3H18                0.022   zinc finger CCCH-type containing 18 
SFRS12                0.022   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.022   splicing factor, arginine/serine-rich 12 isoform b [...
FIP1L1                0.022   FIP1 like 1 isoform 3 
FIP1L1                0.022   FIP1 like 1 isoform 1 
LOC100131202          0.022   PREDICTED: hypothetical protein 
RERE                  0.021   atrophin-1 like protein isoform b 
RERE                  0.021   atrophin-1 like protein isoform a 
RERE                  0.021   atrophin-1 like protein isoform a 
LOC100288837          0.020   PREDICTED: hypothetical protein XP_002343931, parti...
FIP1L1                0.020   FIP1 like 1 isoform 2 
PELP1                 0.020   proline, glutamic acid and leucine rich protein 1 [...
ACIN1                 0.020   apoptotic chromatin condensation inducer 1 
LOC100134067          0.019   PREDICTED: hypothetical protein 
LOC100289089          0.019   PREDICTED: hypothetical protein XP_002343359 
IK                    0.019   RED protein 
ITSN1                 0.019   intersectin 1 isoform ITSN-s 
ITSN1                 0.019   intersectin 1 isoform ITSN-l 
RNF20                 0.019   ring finger protein 20 
MAP4K4                0.019   mitogen-activated protein kinase kinase kinase kinas...
RDBP                  0.018   RD RNA-binding protein 
PRPF38B               0.018   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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