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Search of human proteins with 92373393
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|92373393 actin-related protein 3-beta isoform 2 [Homo
sapiens]
(348 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|92373393 actin-related protein 3-beta isoform 2 [Homo sapiens] 722 0.0
gi|9966913 actin-related protein 3-beta isoform 1 [Homo sapiens] 652 0.0
gi|5031573 ARP3 actin-related protein 3 homolog [Homo sapiens] 603 e-173
gi|239743387 PREDICTED: actin-related Arp11 [Homo sapiens] 381 e-106
gi|239509084 PREDICTED: actin-related Arp11 [Homo sapiens] 381 e-106
gi|239754791 PREDICTED: actin-related Arp11 [Homo sapiens] 380 e-105
gi|4501885 beta actin [Homo sapiens] 199 3e-51
gi|4501887 actin, gamma 1 propeptide [Homo sapiens] 199 4e-51
gi|4501881 actin, alpha 1, skeletal muscle [Homo sapiens] 198 7e-51
gi|4885049 cardiac muscle alpha actin 1 proprotein [Homo sapiens] 198 7e-51
gi|4501883 alpha 2 actin [Homo sapiens] 197 2e-50
gi|213688375 alpha 2 actin [Homo sapiens] 197 2e-50
gi|4501889 actin, gamma 2 propeptide [Homo sapiens] 197 2e-50
gi|63055057 actin, beta-like 2 [Homo sapiens] 196 3e-50
gi|11342680 ARP1 actin-related protein 1 homolog B, centractin b... 181 7e-46
gi|5031569 ARP1 actin-related protein 1 homolog A, centractin al... 179 3e-45
gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens] 176 4e-44
gi|239741786 PREDICTED: kappa-actin [Homo sapiens] 176 4e-44
gi|134133226 protein expressed in prostate, ovary, testis, and p... 175 6e-44
gi|239741769 PREDICTED: similar to protein expressed in prostate... 174 1e-43
gi|88953571 PREDICTED: similar to protein expressed in prostate,... 174 1e-43
gi|53692187 actin-related protein 2 isoform a [Homo sapiens] 174 1e-43
gi|5031571 actin-related protein 2 isoform b [Homo sapiens] 173 2e-43
gi|239753333 PREDICTED: actin, beta-like 3 [Homo sapiens] 172 3e-43
gi|113413200 PREDICTED: similar to protein expressed in prostate... 172 3e-43
gi|153791352 prostate, ovary, testis expressed protein on chromo... 172 4e-43
gi|194097462 actin-like 9 [Homo sapiens] 148 8e-36
gi|29893808 actin-related protein M2 [Homo sapiens] 146 3e-35
gi|19923076 actin-related protein T1 [Homo sapiens] 145 7e-35
gi|239750113 PREDICTED: similar to Actin, alpha 1, skeletal musc... 142 4e-34
>gi|92373393 actin-related protein 3-beta isoform 2 [Homo sapiens]
Length = 348
Score = 722 bits (1863), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MAGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDF 60
MAGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDF
Sbjct: 1 MAGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDF 60
Query: 61 FIGDEAIDKPTYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTP 120
FIGDEAIDKPTYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTP
Sbjct: 61 FIGDEAIDKPTYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTP 120
Query: 121 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPV 180
ENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPV
Sbjct: 121 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPV 180
Query: 181 AEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVK 240
AEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVK
Sbjct: 181 AEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVK 240
Query: 241 EFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVV 300
EFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVV
Sbjct: 241 EFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVV 300
Query: 301 DEVIQNCPIDVRRPLYKPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 348
DEVIQNCPIDVRRPLYKPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS
Sbjct: 301 DEVIQNCPIDVRRPLYKPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 348
>gi|9966913 actin-related protein 3-beta isoform 1 [Homo sapiens]
Length = 418
Score = 652 bits (1683), Expect = 0.0
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MAGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDF 60
MAGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDF
Sbjct: 1 MAGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDF 60
Query: 61 FIGDEAIDKPTYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTP 120
FIGDEAIDKPTYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTP
Sbjct: 61 FIGDEAIDKPTYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTP 120
Query: 121 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPV 180
ENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPV
Sbjct: 121 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPV 180
Query: 181 AEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVK 240
AEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVK
Sbjct: 181 AEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVK 240
Query: 241 EFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVV 300
EFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVV
Sbjct: 241 EFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVV 300
Query: 301 DEVIQNCPIDVRRPLYK 317
DEVIQNCPIDVRRPLYK
Sbjct: 301 DEVIQNCPIDVRRPLYK 317
Score = 73.9 bits (180), Expect = 2e-13
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 318 PEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 348
PEFFQVCHTKKDYEEYGPSICRHNPVFGVMS
Sbjct: 388 PEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 418
>gi|5031573 ARP3 actin-related protein 3 homolog [Homo sapiens]
Length = 418
Score = 603 bits (1554), Expect = e-173
Identities = 287/317 (90%), Positives = 304/317 (95%)
Query: 1 MAGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDF 60
MAG LP CVVDCGTGYTKLGYAGNTEPQFIIPSCIAI+ESAKV DQAQRRV++GVDDLDF
Sbjct: 1 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDF 60
Query: 61 FIGDEAIDKPTYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTP 120
FIGDEAI+KPTYATKWPIRHGI+EDWDLMERFMEQV+FKYLRAEPEDHYFL+TEPPLNTP
Sbjct: 61 FIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTP 120
Query: 121 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPV 180
ENREY AEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTG VIDSGDGVTHVIPV
Sbjct: 121 ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPV 180
Query: 181 AEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVK 240
AEGYVIGSCIKHIPIAGRDITYFIQQLLR+REVGIPPEQSLETAKA+KE+Y Y+CPD+VK
Sbjct: 181 AEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK 240
Query: 241 EFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVV 300
EF KYD D KWIKQYTGINAI++K+F IDVGYERFLGPEIFFHPEFANPDF + IS+VV
Sbjct: 241 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVV 300
Query: 301 DEVIQNCPIDVRRPLYK 317
DEVIQNCPIDVRRPLYK
Sbjct: 301 DEVIQNCPIDVRRPLYK 317
Score = 69.7 bits (169), Expect = 4e-12
Identities = 29/31 (93%), Positives = 30/31 (96%)
Query: 318 PEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 348
PEF+QVCHTKKDYEE GPSICRHNPVFGVMS
Sbjct: 388 PEFYQVCHTKKDYEEIGPSICRHNPVFGVMS 418
>gi|239743387 PREDICTED: actin-related Arp11 [Homo sapiens]
Length = 210
Score = 381 bits (979), Expect = e-106
Identities = 187/190 (98%), Positives = 188/190 (98%)
Query: 130 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSC 189
MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSC
Sbjct: 1 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSC 60
Query: 190 IKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDP 249
IKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDP
Sbjct: 61 IKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDP 120
Query: 250 RKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVIQNCPI 309
+KWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPD MESISDVVDEVIQNCPI
Sbjct: 121 QKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDSMESISDVVDEVIQNCPI 180
Query: 310 DVRRPLYKPE 319
DVRRPLYK E
Sbjct: 181 DVRRPLYKME 190
>gi|239509084 PREDICTED: actin-related Arp11 [Homo sapiens]
Length = 210
Score = 381 bits (979), Expect = e-106
Identities = 187/190 (98%), Positives = 188/190 (98%)
Query: 130 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSC 189
MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSC
Sbjct: 1 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSC 60
Query: 190 IKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDP 249
IKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDP
Sbjct: 61 IKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDP 120
Query: 250 RKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVIQNCPI 309
+KWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPD MESISDVVDEVIQNCPI
Sbjct: 121 QKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDSMESISDVVDEVIQNCPI 180
Query: 310 DVRRPLYKPE 319
DVRRPLYK E
Sbjct: 181 DVRRPLYKME 190
>gi|239754791 PREDICTED: actin-related Arp11 [Homo sapiens]
Length = 210
Score = 380 bits (975), Expect = e-105
Identities = 187/190 (98%), Positives = 187/190 (98%)
Query: 130 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSC 189
MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSC
Sbjct: 1 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSC 60
Query: 190 IKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDP 249
IKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDP
Sbjct: 61 IKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDP 120
Query: 250 RKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVIQNCPI 309
KWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPD MESISDVVDEVIQNCPI
Sbjct: 121 WKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDSMESISDVVDEVIQNCPI 180
Query: 310 DVRRPLYKPE 319
DVRRPLYK E
Sbjct: 181 DVRRPLYKME 190
>gi|4501885 beta actin [Homo sapiens]
Length = 375
Score = 199 bits (506), Expect = 3e-51
Identities = 120/326 (36%), Positives = 170/326 (52%), Gaps = 42/326 (12%)
Query: 1 MAGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDF 60
M + VVD G+G K G+AG+ P+ + PS + + V+ G+ D
Sbjct: 1 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--------RPRHQGVMVGMGQKDS 52
Query: 61 FIGDEAIDKPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNT 119
++GDEA K T K+PI HGI+ +WD ME+ + LR PE+H L+TE PLN
Sbjct: 53 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 112
Query: 120 PENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIP 179
NRE + +IMFE+FN P +Y+A+QAVL+L AS + TGIV+DSGDGVTH +P
Sbjct: 113 KANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVMDSGDGVTHTVP 164
Query: 180 VAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIV 239
+ EGY + I + +AGRD+T ++ ++L ER E + IKEK CY+ D
Sbjct: 165 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 224
Query: 240 KEFAKYDVDPRKWIKQYTGINAINQKKF-------VIDVGYERFLGPEIFFHPEFANPDF 292
+E A T ++ + +K VI +G ERF PE F P F
Sbjct: 225 QEMA-------------TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG--- 268
Query: 293 MES--ISDVVDEVIQNCPIDVRRPLY 316
MES I + I C +D+R+ LY
Sbjct: 269 MESCGIHETTFNSIMKCDVDIRKDLY 294
>gi|4501887 actin, gamma 1 propeptide [Homo sapiens]
Length = 375
Score = 199 bits (505), Expect = 4e-51
Identities = 119/326 (36%), Positives = 170/326 (52%), Gaps = 42/326 (12%)
Query: 1 MAGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDF 60
M + V+D G+G K G+AG+ P+ + PS + + V+ G+ D
Sbjct: 1 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVG--------RPRHQGVMVGMGQKDS 52
Query: 61 FIGDEAIDKPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNT 119
++GDEA K T K+PI HGI+ +WD ME+ + LR PE+H L+TE PLN
Sbjct: 53 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 112
Query: 120 PENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIP 179
NRE + +IMFE+FN P +Y+A+QAVL+L AS + TGIV+DSGDGVTH +P
Sbjct: 113 KANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVMDSGDGVTHTVP 164
Query: 180 VAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIV 239
+ EGY + I + +AGRD+T ++ ++L ER E + IKEK CY+ D
Sbjct: 165 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 224
Query: 240 KEFAKYDVDPRKWIKQYTGINAINQKKF-------VIDVGYERFLGPEIFFHPEFANPDF 292
+E A T ++ + +K VI +G ERF PE F P F
Sbjct: 225 QEMA-------------TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG--- 268
Query: 293 MES--ISDVVDEVIQNCPIDVRRPLY 316
MES I + I C +D+R+ LY
Sbjct: 269 MESCGIHETTFNSIMKCDVDIRKDLY 294
>gi|4501881 actin, alpha 1, skeletal muscle [Homo sapiens]
Length = 377
Score = 198 bits (503), Expect = 7e-51
Identities = 121/318 (38%), Positives = 167/318 (52%), Gaps = 42/318 (13%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V D G+G K G+AG+ P+ + PS + + V+ G+ D ++GDEA
Sbjct: 11 VCDNGSGLVKAGFAGDDAPRAVFPSIVG--------RPRHQGVMVGMGQKDSYVGDEAQS 62
Query: 69 KPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+PI HGII +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 63 KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 122
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FNVP +Y+A+QAVL+L AS + TGIV+DSGDGVTH +P+ EGY +
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHNVPIYEGYALP 174
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDV 247
I + +AGRD+T ++ ++L ER E + IKEK CY+ D E A
Sbjct: 175 HAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMA---- 230
Query: 248 DPRKWIKQYTGINAINQKKF-------VIDVGYERFLGPEIFFHPEFANPDFMES--ISD 298
T ++ + +K VI +G ERF PE F P F MES I +
Sbjct: 231 ---------TAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIG---MESAGIHE 278
Query: 299 VVDEVIQNCPIDVRRPLY 316
I C ID+R+ LY
Sbjct: 279 TTYNSIMKCDIDIRKDLY 296
>gi|4885049 cardiac muscle alpha actin 1 proprotein [Homo sapiens]
Length = 377
Score = 198 bits (503), Expect = 7e-51
Identities = 121/318 (38%), Positives = 167/318 (52%), Gaps = 42/318 (13%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V D G+G K G+AG+ P+ + PS + + V+ G+ D ++GDEA
Sbjct: 11 VCDNGSGLVKAGFAGDDAPRAVFPSIVG--------RPRHQGVMVGMGQKDSYVGDEAQS 62
Query: 69 KPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+PI HGII +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 63 KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 122
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FNVP +Y+A+QAVL+L AS + TGIV+DSGDGVTH +P+ EGY +
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHNVPIYEGYALP 174
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDV 247
I + +AGRD+T ++ ++L ER E + IKEK CY+ D E A
Sbjct: 175 HAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMA---- 230
Query: 248 DPRKWIKQYTGINAINQKKF-------VIDVGYERFLGPEIFFHPEFANPDFMES--ISD 298
T ++ + +K VI +G ERF PE F P F MES I +
Sbjct: 231 ---------TAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIG---MESAGIHE 278
Query: 299 VVDEVIQNCPIDVRRPLY 316
I C ID+R+ LY
Sbjct: 279 TTYNSIMKCDIDIRKDLY 296
>gi|4501883 alpha 2 actin [Homo sapiens]
Length = 377
Score = 197 bits (500), Expect = 2e-50
Identities = 121/318 (38%), Positives = 167/318 (52%), Gaps = 42/318 (13%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V D G+G K G+AG+ P+ + PS + + V+ G+ D ++GDEA
Sbjct: 11 VCDNGSGLCKAGFAGDDAPRAVFPSIVG--------RPRHQGVMVGMGQKDSYVGDEAQS 62
Query: 69 KPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+PI HGII +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 63 KRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMT 122
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FNVP +Y+A+QAVL+L AS + TGIV+DSGDGVTH +P+ EGY +
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHNVPIYEGYALP 174
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDV 247
I + +AGRD+T ++ ++L ER E + IKEK CY+ D E A
Sbjct: 175 HAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMA---- 230
Query: 248 DPRKWIKQYTGINAINQKKF-------VIDVGYERFLGPEIFFHPEFANPDFMES--ISD 298
T ++ + +K VI +G ERF PE F P F MES I +
Sbjct: 231 ---------TAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIG---MESAGIHE 278
Query: 299 VVDEVIQNCPIDVRRPLY 316
I C ID+R+ LY
Sbjct: 279 TTYNSIMKCDIDIRKDLY 296
>gi|213688375 alpha 2 actin [Homo sapiens]
Length = 377
Score = 197 bits (500), Expect = 2e-50
Identities = 121/318 (38%), Positives = 167/318 (52%), Gaps = 42/318 (13%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V D G+G K G+AG+ P+ + PS + + V+ G+ D ++GDEA
Sbjct: 11 VCDNGSGLCKAGFAGDDAPRAVFPSIVG--------RPRHQGVMVGMGQKDSYVGDEAQS 62
Query: 69 KPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+PI HGII +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 63 KRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMT 122
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FNVP +Y+A+QAVL+L AS + TGIV+DSGDGVTH +P+ EGY +
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHNVPIYEGYALP 174
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDV 247
I + +AGRD+T ++ ++L ER E + IKEK CY+ D E A
Sbjct: 175 HAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMA---- 230
Query: 248 DPRKWIKQYTGINAINQKKF-------VIDVGYERFLGPEIFFHPEFANPDFMES--ISD 298
T ++ + +K VI +G ERF PE F P F MES I +
Sbjct: 231 ---------TAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIG---MESAGIHE 278
Query: 299 VVDEVIQNCPIDVRRPLY 316
I C ID+R+ LY
Sbjct: 279 TTYNSIMKCDIDIRKDLY 296
>gi|4501889 actin, gamma 2 propeptide [Homo sapiens]
Length = 376
Score = 197 bits (500), Expect = 2e-50
Identities = 121/318 (38%), Positives = 167/318 (52%), Gaps = 42/318 (13%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V D G+G K G+AG+ P+ + PS + + V+ G+ D ++GDEA
Sbjct: 10 VCDNGSGLCKAGFAGDDAPRAVFPSIVG--------RPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 69 KPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+PI HGII +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 62 KRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMT 121
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FNVP +Y+A+QAVL+L AS + TGIV+DSGDGVTH +P+ EGY +
Sbjct: 122 QIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHNVPIYEGYALP 173
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDV 247
I + +AGRD+T ++ ++L ER E + IKEK CY+ D E A
Sbjct: 174 HAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMA---- 229
Query: 248 DPRKWIKQYTGINAINQKKF-------VIDVGYERFLGPEIFFHPEFANPDFMES--ISD 298
T ++ + +K VI +G ERF PE F P F MES I +
Sbjct: 230 ---------TAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIG---MESAGIHE 277
Query: 299 VVDEVIQNCPIDVRRPLY 316
I C ID+R+ LY
Sbjct: 278 TTYNSIMKCDIDIRKDLY 295
>gi|63055057 actin, beta-like 2 [Homo sapiens]
Length = 376
Score = 196 bits (498), Expect = 3e-50
Identities = 114/315 (36%), Positives = 165/315 (52%), Gaps = 28/315 (8%)
Query: 5 LPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGD 64
L VVD G+G K G+ G+ P+ + PS I + V+ G+ D ++GD
Sbjct: 6 LSALVVDNGSGMCKAGFGGDDAPRAVFPSMIG--------RPRHQGVMVGMGQKDCYVGD 57
Query: 65 EAIDKPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENR 123
EA K T K+PI HG++ +WD ME+ + LR P++H L+TE PLN NR
Sbjct: 58 EAQSKRGVLTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINR 117
Query: 124 EYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEG 183
E + +IMFE+FN P +Y+A+QAVL+L AS + TGIV+DSGDGVTH++P+ EG
Sbjct: 118 EKMTQIMFEAFNTPAMYVAIQAVLSLYASGRT--------TGIVMDSGDGVTHIVPIYEG 169
Query: 184 YVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEF- 242
Y + I + +AGRD+T ++ ++L ER E + +KEK CY+ D +E
Sbjct: 170 YALPHAILRLDLAGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMV 229
Query: 243 -AKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVD 301
A P + + G VI +G ERF PE F P F + I +
Sbjct: 230 RAAASSSPERSYELPDG--------QVITIGNERFRCPEAIFQPSFLGIE-SSGIHETTF 280
Query: 302 EVIQNCPIDVRRPLY 316
I C +D+R+ LY
Sbjct: 281 NSIMKCDVDIRKDLY 295
>gi|11342680 ARP1 actin-related protein 1 homolog B, centractin beta
[Homo sapiens]
Length = 376
Score = 181 bits (460), Expect = 7e-46
Identities = 112/312 (35%), Positives = 173/312 (55%), Gaps = 29/312 (9%)
Query: 7 PCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEA 66
P V+D G+G K G+AG+ P++ P+ + + RV+ G + D FIG +A
Sbjct: 11 PVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPK--------HMRVMAGALEGDLFIGPKA 62
Query: 67 IDKPTYAT-KWPIRHGIIEDWDLMERFMEQVVFK-YLRAEPEDHYFLMTEPPLNTPENRE 124
+ T ++P+ HG++ DW+ MER + V K L+ E+H L+TE PLN +NRE
Sbjct: 63 EEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNRE 122
Query: 125 YLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGY 184
AE+ FE+FNVP L+I++QAVL+L A+ + TG+V+DSGDGVTH +P+ EG+
Sbjct: 123 KAAEVFFETFNVPALFISMQAVLSLYATGRT--------TGVVLDSGDGVTHAVPIYEGF 174
Query: 185 VIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAK 244
+ I + IAGRD++ +++ LLR+ V E + IKE+ CY+ + K+ A
Sbjct: 175 AMPHSIMRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEA- 233
Query: 245 YDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVI 304
++ K QYT + +DVG RF PE+ F P+ D E + +VV I
Sbjct: 234 --LETEK--VQYTLPDG-----STLDVGPARFRAPELLFQPDLVG-DESEGLHEVVAFAI 283
Query: 305 QNCPIDVRRPLY 316
+D+RR L+
Sbjct: 284 HKSDMDLRRTLF 295
>gi|5031569 ARP1 actin-related protein 1 homolog A, centractin alpha
[Homo sapiens]
Length = 376
Score = 179 bits (455), Expect = 3e-45
Identities = 108/312 (34%), Positives = 171/312 (54%), Gaps = 29/312 (9%)
Query: 7 PCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEA 66
P V+D G+G K G+AG+ P++ P+ + + RV+ G + D FIG +A
Sbjct: 11 PVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHV--------RVMAGALEGDIFIGPKA 62
Query: 67 ID-KPTYATKWPIRHGIIEDWDLMERFMEQVVFK-YLRAEPEDHYFLMTEPPLNTPENRE 124
+ + + ++P+ HGI++DW+ MER + V K L+ E+H L+TE PLN +NRE
Sbjct: 63 EEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRE 122
Query: 125 YLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGY 184
AE+ FE+FNVP L+I++QAVL+L A+ + TG+V+DSGDGVTH +P+ EG+
Sbjct: 123 RAAEVFFETFNVPALFISMQAVLSLYATGRT--------TGVVLDSGDGVTHAVPIYEGF 174
Query: 185 VIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAK 244
+ I I IAGRD++ F++ LR+ E KAIKE+ CY+ + K+
Sbjct: 175 AMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETL 234
Query: 245 YDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVI 304
+ ++ + I++G RF PE+ F P+ + E I +V+ I
Sbjct: 235 ETEKAQYYLPDGS----------TIEIGPSRFRAPELLFRPDLIGEE-SEGIHEVLVFAI 283
Query: 305 QNCPIDVRRPLY 316
Q +D+RR L+
Sbjct: 284 QKSDMDLRRTLF 295
>gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens]
Length = 924
Score = 176 bits (445), Expect = 4e-44
Identities = 109/317 (34%), Positives = 160/317 (50%), Gaps = 40/317 (12%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V+D G+G K G+AG+ PQ + PS + + ++ G+ + ++G EA
Sbjct: 558 VIDNGSGMCKAGFAGDDAPQAVFPSIVG--------RPRHQGMMEGMHQKESYVGKEAQS 609
Query: 69 KPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+P+ HGII +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 610 KRGMLTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 669
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FN P +Y+A+QAVL+L S + TGIV+DSGDG TH +P+ EG +
Sbjct: 670 QIMFETFNTPAMYVAIQAVLSLYTSGRT--------TGIVMDSGDGFTHTVPIYEGNALP 721
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDV 247
+ +AGR++T ++ ++L ER E + IKEK CY+ D +E A
Sbjct: 722 HATLRLDLAGRELTDYLMKILTERGYRFTTTAEQEIVRDIKEKLCYVALDSEQEMA---- 777
Query: 248 DPRKWIKQYTGINAINQKKF------VIDVGYERFLGPEIFFHPEFANPDFMES--ISDV 299
++ +K + VI +G ERF PE F P F MES I
Sbjct: 778 --------MAASSSSVEKSYELPDGQVITIGNERFRCPEALFQPCFLG---MESCGIHKT 826
Query: 300 VDEVIQNCPIDVRRPLY 316
I +D+R+ LY
Sbjct: 827 TFNSIVKSDVDIRKDLY 843
>gi|239741786 PREDICTED: kappa-actin [Homo sapiens]
Length = 924
Score = 176 bits (445), Expect = 4e-44
Identities = 109/317 (34%), Positives = 160/317 (50%), Gaps = 40/317 (12%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V+D G+G K G+AG+ PQ + PS + + ++ G+ + ++G EA
Sbjct: 558 VIDNGSGMCKAGFAGDDAPQAVFPSIVG--------RPRHQGMMEGMHQKESYVGKEAQS 609
Query: 69 KPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+P+ HGII +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 610 KRGMLTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 669
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FN P +Y+A+QAVL+L S + TGIV+DSGDG TH +P+ EG +
Sbjct: 670 QIMFETFNTPAMYVAIQAVLSLYTSGRT--------TGIVMDSGDGFTHTVPIYEGNALP 721
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDV 247
+ +AGR++T ++ ++L ER E + IKEK CY+ D +E A
Sbjct: 722 HATLRLDLAGRELTDYLMKILTERGYRFTTTAEQEIVRDIKEKLCYVALDSEQEMA---- 777
Query: 248 DPRKWIKQYTGINAINQKKF------VIDVGYERFLGPEIFFHPEFANPDFMES--ISDV 299
++ +K + VI +G ERF PE F P F MES I
Sbjct: 778 --------MAASSSSVEKSYELPDGQVITIGNERFRCPEALFQPCFLG---MESCGIHKT 826
Query: 300 VDEVIQNCPIDVRRPLY 316
I +D+R+ LY
Sbjct: 827 TFNSIVKSDVDIRKDLY 843
>gi|134133226 protein expressed in prostate, ovary, testis, and
placenta 2 [Homo sapiens]
Length = 1075
Score = 175 bits (443), Expect = 6e-44
Identities = 109/318 (34%), Positives = 162/318 (50%), Gaps = 42/318 (13%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V+D G+G K G+AG+ P+ + PS + Q+ ++ G+ + ++G EA
Sbjct: 709 VIDNGSGMCKAGFAGDDAPRAVFPSIVG--------RPRQQGMMGGMHQKESYVGKEAQS 760
Query: 69 KPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+P+ HGII +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 761 KRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 820
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FN P +Y+A+QAV +L S + TGIV+DSGDGVTH +P+ EG +
Sbjct: 821 QIMFETFNTPAMYVAIQAVPSLYTSGRT--------TGIVMDSGDGVTHTVPIYEGNALP 872
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDV 247
+ +AGR++ ++ ++L ER E + IKEK CY+ D +E A
Sbjct: 873 HATLRLDLAGRELPDYLMKILTERGYRFTTMAEREIVRDIKEKLCYVALDFEQEMA---- 928
Query: 248 DPRKWIKQYTGINAINQKKF-------VIDVGYERFLGPEIFFHPEFANPDFMES--ISD 298
T ++ + +K VI +G ERF PE F P F MES I +
Sbjct: 929 ---------TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPCFLG---MESCGIHE 976
Query: 299 VVDEVIQNCPIDVRRPLY 316
I +D+R+ LY
Sbjct: 977 TTFNSIMKSDVDIRKDLY 994
>gi|239741769 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 [Homo sapiens]
Length = 952
Score = 174 bits (441), Expect = 1e-43
Identities = 108/311 (34%), Positives = 160/311 (51%), Gaps = 28/311 (9%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V+D G+G K G+AG+ P+ + PS + Q+ ++ G+ + ++G EA
Sbjct: 586 VIDNGSGMCKAGFAGDDAPRAVFPSIVG--------RPRQQGMMGGMHQKESYVGKEAQS 637
Query: 69 KPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+P+ HGII +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 638 KRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 697
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FN P +Y+A+QA+L+L S + TGIV+DSGDGVTH +P+ +G +
Sbjct: 698 QIMFETFNTPAMYVAIQAMLSLYTSGRT--------TGIVMDSGDGVTHTVPIYDGNALP 749
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDV 247
+ +AGR++T ++ ++L ER E + IKEK CY+ D +E A
Sbjct: 750 HATLRLDLAGRELTDYLMKILTERGYRFTTMAEREIVRDIKEKLCYVALDFEQEMA-MAA 808
Query: 248 DPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMES--ISDVVDEVIQ 305
K Y + VI +G E F PE F P F MES I + I
Sbjct: 809 SSSSLEKSYELPDG-----QVITIGNEWFRCPEALFQPCFLG---MESCGIHETTFNSIM 860
Query: 306 NCPIDVRRPLY 316
+D+R+ LY
Sbjct: 861 KSDVDIRKDLY 871
>gi|88953571 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 isoform 2 [Homo sapiens]
Length = 1075
Score = 174 bits (441), Expect = 1e-43
Identities = 108/311 (34%), Positives = 160/311 (51%), Gaps = 28/311 (9%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V+D G+G K G+AG+ P+ + PS + Q+ ++ G+ + ++G EA
Sbjct: 709 VIDNGSGMCKAGFAGDDAPRAVFPSIVG--------RPRQQGMMGGMHQKESYVGKEAQS 760
Query: 69 KPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+P+ HGII +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 761 KRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 820
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FN P +Y+A+QA+L+L S + TGIV+DSGDGVTH +P+ +G +
Sbjct: 821 QIMFETFNTPAMYVAIQAMLSLYTSGRT--------TGIVMDSGDGVTHTVPIYDGNALP 872
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDV 247
+ +AGR++T ++ ++L ER E + IKEK CY+ D +E A
Sbjct: 873 HATLRLDLAGRELTDYLMKILTERGYRFTTMAEREIVRDIKEKLCYVALDFEQEMA-MAA 931
Query: 248 DPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMES--ISDVVDEVIQ 305
K Y + VI +G E F PE F P F MES I + I
Sbjct: 932 SSSSLEKSYELPDG-----QVITIGNEWFRCPEALFQPCFLG---MESCGIHETTFNSIM 983
Query: 306 NCPIDVRRPLY 316
+D+R+ LY
Sbjct: 984 KSDVDIRKDLY 994
>gi|53692187 actin-related protein 2 isoform a [Homo sapiens]
Length = 399
Score = 174 bits (440), Expect = 1e-43
Identities = 108/314 (34%), Positives = 169/314 (53%), Gaps = 24/314 (7%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIA---IRESAKVVDQAQRRVLRGVDDLDFFIGDE 65
V D GTG+ K GYAG+ P+ I P+ + IR + KV + ++ +D +GDE
Sbjct: 10 VCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIE----IKNNKKMDLMVGDE 65
Query: 66 AID-KPTYATKWPIRHGIIEDWDLMERFMEQVVF-KYLRAEPEDHYFLMTEPPLNTPENR 123
A + + +P+ +GI+ +WD M+ + + L + + L+TEPP+N +NR
Sbjct: 66 ASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNR 125
Query: 124 EYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEG 183
E + E+MFE++ G+Y+A+QAVL L A + LTG+V+DSGDGVTH+ PV EG
Sbjct: 126 EKIVEVMFETYQFSGVYVAIQAVLTLYA--------QGLLTGVVVDSGDGVTHICPVYEG 177
Query: 184 YVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFA 243
+ + + + IAGRDIT ++ +LL R ET + IKEK CY+ +I +E
Sbjct: 178 FSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQE-Q 236
Query: 244 KYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEV 303
K ++ ++ YT + +I VG ERF PE F P N + + +++++
Sbjct: 237 KLALETTVLVESYTLPDG-----RIIKVGGERFEAPEALFQPHLINVEGV-GVAELLFNT 290
Query: 304 IQNCPIDVRRPLYK 317
IQ ID R YK
Sbjct: 291 IQAADIDTRSEFYK 304
>gi|5031571 actin-related protein 2 isoform b [Homo sapiens]
Length = 394
Score = 173 bits (438), Expect = 2e-43
Identities = 108/314 (34%), Positives = 168/314 (53%), Gaps = 29/314 (9%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIA---IRESAKVVDQAQRRVLRGVDDLDFFIGDE 65
V D GTG+ K GYAG+ P+ I P+ + IR + KV + ++ D +GDE
Sbjct: 10 VCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGN---------IEIKDLMVGDE 60
Query: 66 AID-KPTYATKWPIRHGIIEDWDLMERFMEQVVF-KYLRAEPEDHYFLMTEPPLNTPENR 123
A + + +P+ +GI+ +WD M+ + + L + + L+TEPP+N +NR
Sbjct: 61 ASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNR 120
Query: 124 EYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEG 183
E + E+MFE++ G+Y+A+QAVL L A + LTG+V+DSGDGVTH+ PV EG
Sbjct: 121 EKIVEVMFETYQFSGVYVAIQAVLTLYA--------QGLLTGVVVDSGDGVTHICPVYEG 172
Query: 184 YVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFA 243
+ + + + IAGRDIT ++ +LL R ET + IKEK CY+ +I +E
Sbjct: 173 FSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQE-Q 231
Query: 244 KYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEV 303
K ++ ++ YT + +I VG ERF PE F P N + + +++++
Sbjct: 232 KLALETTVLVESYTLPDG-----RIIKVGGERFEAPEALFQPHLINVEGV-GVAELLFNT 285
Query: 304 IQNCPIDVRRPLYK 317
IQ ID R YK
Sbjct: 286 IQAADIDTRSEFYK 299
>gi|239753333 PREDICTED: actin, beta-like 3 [Homo sapiens]
Length = 924
Score = 172 bits (437), Expect = 3e-43
Identities = 108/317 (34%), Positives = 159/317 (50%), Gaps = 40/317 (12%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V+D G+G K G+AG+ PQ + PS + + ++ G+ + ++G EA
Sbjct: 558 VIDNGSGMCKAGFAGDDAPQAVFPSIVG--------RPRHQGMMEGMHQKESYVGKEAQS 609
Query: 69 KPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+P+ HGII +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 610 KRGMLTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 669
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FN P +Y+A+QAVL+L S + TGIV+DSGDG TH +P+ EG +
Sbjct: 670 QIMFETFNTPAMYVAIQAVLSLYTSGRT--------TGIVMDSGDGFTHTVPIYEGNALP 721
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDV 247
+ +AGR++T ++ ++L ER E IKEK CY+ D +E A
Sbjct: 722 HATLRLDLAGRELTDYLMKILTERGYRFTTTAEQEIVCDIKEKLCYVALDSKQEMA---- 777
Query: 248 DPRKWIKQYTGINAINQKKF------VIDVGYERFLGPEIFFHPEFANPDFMES--ISDV 299
++ +K + VI +G ERF PE F P F MES I
Sbjct: 778 --------MAASSSSVEKSYELPDGQVITIGNERFRCPEALFQPCFLG---MESCGIHKT 826
Query: 300 VDEVIQNCPIDVRRPLY 316
I +D+R+ +Y
Sbjct: 827 TFNSIVKSDVDIRKDVY 843
>gi|113413200 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 [Homo sapiens]
Length = 1038
Score = 172 bits (437), Expect = 3e-43
Identities = 107/311 (34%), Positives = 159/311 (51%), Gaps = 28/311 (9%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V+D G+G K G+AG+ P+ + PS + Q+ ++ G+ + ++G EA
Sbjct: 672 VIDNGSGMCKAGFAGDDAPRAVFPSIVGCPR--------QQGMMGGMHQKESYVGKEAQS 723
Query: 69 KPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+P+ HGII +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 724 KRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 783
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FN P +Y+A+QA+L+L S + TGIV+DSGDGVTH +P+ +G +
Sbjct: 784 QIMFETFNTPAMYVAIQAMLSLYTSGRT--------TGIVMDSGDGVTHTVPIYDGNALP 835
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDV 247
+ +AGR++T ++ ++L ER E + IKEK CY+ D +E A
Sbjct: 836 HATLRLDLAGRELTDYLMKILTERGYRFTTMAEREIVRDIKEKLCYVALDFEQEMAMV-A 894
Query: 248 DPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMES--ISDVVDEVIQ 305
K Y + VI + E F PE F P F MES I + I
Sbjct: 895 SSSSLEKSYELPDG-----QVITISNEWFRCPEALFQPCFLG---MESCGIHETTFNSIM 946
Query: 306 NCPIDVRRPLY 316
+D+R+ LY
Sbjct: 947 KSDVDIRKDLY 957
>gi|153791352 prostate, ovary, testis expressed protein on
chromosome 2 [Homo sapiens]
Length = 1075
Score = 172 bits (436), Expect = 4e-43
Identities = 108/311 (34%), Positives = 158/311 (50%), Gaps = 28/311 (9%)
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V+D G+G K G+AG+ P+ + PS + Q+ ++ G+ + ++G EA
Sbjct: 709 VIDNGSGMCKAGFAGDDAPRAVFPSIVG--------RPRQQGMMGGMHQKESYVGKEAQS 760
Query: 69 KPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+P+ HGII +WD ME+ + LR PE+H L+TE LN NRE +
Sbjct: 761 KRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEATLNPKANREKMT 820
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FN P +Y+A+QAVL+L S + TGIV+DSGDGVTH +P+ EG +
Sbjct: 821 QIMFETFNTPAMYVAIQAVLSLYTSGRT--------TGIVMDSGDGVTHTVPIYEGNALP 872
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDV 247
+ +AGR++ ++ ++L E E + IKEK CY+ D +E A
Sbjct: 873 HATLRLDLAGRELPDYLMKILTEHGYRFTTMAEREIVRDIKEKLCYVALDFEQEMATV-A 931
Query: 248 DPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMES--ISDVVDEVIQ 305
K Y + VI +G ERF PE F P F MES I + I
Sbjct: 932 SSSSLEKSYELPDG-----QVITIGNERFRCPEALFQPCFLG---MESCGIHETTFNSIM 983
Query: 306 NCPIDVRRPLY 316
+D+R+ LY
Sbjct: 984 KSDVDIRKDLY 994
>gi|194097462 actin-like 9 [Homo sapiens]
Length = 416
Score = 148 bits (373), Expect = 8e-36
Identities = 90/290 (31%), Positives = 146/290 (50%), Gaps = 31/290 (10%)
Query: 1 MAGSLPP----CVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVD 56
+A LPP V+D GTG K+G+AG P + + + + Q ++ G
Sbjct: 41 VADRLPPKTGVVVIDMGTGTCKVGFAGQASPTYTVATILGC--------QPKKPATSGQS 92
Query: 57 DLDFFIGDEAIDKPTYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPP 116
L FIG+ A P P+R GI+ DWD E ++ LR DH L ++PP
Sbjct: 93 GLQTFIGEAARVLPELTLVQPLRSGIVVDWDAAELIWRHLLEHDLRVATHDHPLLFSDPP 152
Query: 117 LNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTH 176
+ NRE L E+ FES P +Y+A Q+VL++ A ++G+V+D+G GVT+
Sbjct: 153 FSPATNREKLVEVAFESLRSPAMYVASQSVLSVYA--------HGRVSGLVVDTGHGVTY 204
Query: 177 VIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIP-PEQSLETAKAIKEKYCYIC 235
+PV +GY + + + +AG +T F+ ++L + G+P +Q L+ + IK YCY+
Sbjct: 205 TVPVFQGYNLLHATERLDLAGNHLTAFLAEML--LQAGLPLGQQDLDLVENIKHHYCYVA 262
Query: 236 PDIVKEFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHP 285
D KE A+ + + ++ +K G + +G E F PE+ F+P
Sbjct: 263 SDFQKEQARPEQEYKRTLKLPDG--------RTVTLGKELFQCPELLFNP 304
>gi|29893808 actin-related protein M2 [Homo sapiens]
Length = 377
Score = 146 bits (368), Expect = 3e-35
Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 28/313 (8%)
Query: 6 PPCVVDCGTGYTKLGYAGNTEPQFIIPSCIA-IRESAKVVDQAQRRVLRGVDDLDFFIGD 64
P + D G+G+ K G +G P+ ++ S + ++ A + Q++ +F+G+
Sbjct: 10 PAVIFDNGSGFCKAGLSGEFGPRHMVSSIVGHLKFQAPSAEANQKK---------YFVGE 60
Query: 65 EAIDKP-TYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENR 123
EA+ K P G+I WD +ER + + L +P D L TEP LN ENR
Sbjct: 61 EALYKQEALQLHSPFERGLITGWDDVERLWKHLFEWELGVKPSDQPLLATEPSLNPRENR 120
Query: 124 EYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEG 183
E +AE+MFE+F VP Y++ QAVLAL AS +TG+V+DSGD VT +P+ EG
Sbjct: 121 EKMAEVMFENFGVPAFYLSDQAVLALYAS--------ACVTGLVVDSGDAVTCTVPIFEG 172
Query: 184 YVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFA 243
Y + + + +AGRDIT + QLL P + IK+K CY+ + KE +
Sbjct: 173 YSLPHAVTKLHVAGRDITELLMQLLLASGHTFPCQLDKGLVDDIKKKLCYVALEPEKELS 232
Query: 244 KYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEV 303
+ P + +++Y + +I +G PE F P+ +S++V
Sbjct: 233 R---RPEEVLREYKLPDG-----NIISLGDPLHQAPEALFVPQQLGSQ-SPGLSNMVSSS 283
Query: 304 IQNCPIDVRRPLY 316
I C D+++ L+
Sbjct: 284 ITKCDTDIQKILF 296
>gi|19923076 actin-related protein T1 [Homo sapiens]
Length = 376
Score = 145 bits (365), Expect = 7e-35
Identities = 103/313 (32%), Positives = 150/313 (47%), Gaps = 27/313 (8%)
Query: 5 LPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGD 64
+P + D G+G K G +G P+ +I S V+ + V + +F+G
Sbjct: 9 VPAVIFDNGSGLCKAGLSGEIGPRHVISS---------VLGHCKFNVPLARLNQKYFVGQ 59
Query: 65 EAIDK-PTYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENR 123
EA+ K +PI G++ WD ME+ + + + L +P LMTEP LN E R
Sbjct: 60 EALYKYEALHLHYPIERGLVTGWDDMEKLWKHLFERELGVKPSQQPVLMTEPSLNPREIR 119
Query: 124 EYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEG 183
E LAE+MFE+F+VPG Y++ AV AL AS +TG+V+DSGDGVT +P+ EG
Sbjct: 120 EKLAEMMFETFSVPGFYLSNHAVAALYAS--------ACVTGLVVDSGDGVTCTVPIFEG 171
Query: 184 YVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFA 243
Y + + + +AGRDIT + +LL P + IKEK CYI + KE
Sbjct: 172 YSLPHAVTKLCMAGRDITEHLTRLLFASGFNFPCILNKAVVNNIKEKLCYIALEPEKEL- 230
Query: 244 KYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEV 303
RK + G + VI G E + PE+ F P+ +S +V
Sbjct: 231 ------RKSRGEVLGAYRL-PDGHVIHFGDELYQVPEVLFAPDQLG-IHSPGLSKMVSSS 282
Query: 304 IQNCPIDVRRPLY 316
I C D++ LY
Sbjct: 283 IMKCDTDIQNKLY 295
>gi|239750113 PREDICTED: similar to Actin, alpha 1, skeletal muscle
[Homo sapiens]
Length = 420
Score = 142 bits (358), Expect = 4e-34
Identities = 86/281 (30%), Positives = 144/281 (51%), Gaps = 30/281 (10%)
Query: 7 PCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEA 66
P + D G+G++K+G+AG P + P+ + VL G+++ D+FIG+E
Sbjct: 5 PLICDYGSGFSKVGFAGMESPMGMFPTVLG--------KLRHDNVLVGMEEEDWFIGEEV 56
Query: 67 IDKPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREY 125
K ++PI +WD ME+ ++ L PE + L+TEP LN ++E
Sbjct: 57 QKKXGKLNLQYPISRATTTNWDNMEKIWHHSFYQVLHVAPEQYPMLVTEPSLNPTPSKEK 116
Query: 126 LAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYV 185
+ +++FE FN+P LY+A + VL+L AS + G+ ++SG+G+TH +P+A+G
Sbjct: 117 VTQVLFEIFNIPALYLANRGVLSLYASGQT--------FGMTVESGEGMTHFVPIADGCP 168
Query: 186 IGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKY 245
+ + IAG+D+T ++ QLL++ + E + +KEK CY+ D KE K
Sbjct: 169 LHQSTFQVDIAGQDLTSYLLQLLKDNVQLLVGTGDREYIRDMKEKCCYVALDFDKEKMKT 228
Query: 246 DVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPE 286
D + Q+K+ + G E +G E FF PE
Sbjct: 229 D-------------SPSCQQKYQLPDGQEITVGQESFFCPE 256
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.142 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,996,001
Number of Sequences: 37866
Number of extensions: 600440
Number of successful extensions: 1357
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1172
Number of HSP's gapped (non-prelim): 79
length of query: 348
length of database: 18,247,518
effective HSP length: 103
effective length of query: 245
effective length of database: 14,347,320
effective search space: 3515093400
effective search space used: 3515093400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.