STRN4 37148

Name: STRN4	Sequence: fasta or formatted (760aa)		NCBI GI: 89886480
Description: zinedin isoform 2		Referenced in: Calmodulin and Calcium WD Repeat Proteins
Other entries for this name: alt prot [753aa] zinedin isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 75 4 C cysteine 1.7 13 1 D aspartate 7.1 54 2 E glutamate 7.2 55 2 F phenylalanine 2.8 21 1 G glycine 9.5 72 6 H histidine 3.3 25 2 I isoleucine 3.0 23 1 K lysine 5.0 38 2 L leucine 9.3 71 2 M methionine 1.4 11 2 N asparagine 2.5 19 1 P proline 6.8 52 3 Q glutamine 3.3 25 1 R arginine 5.0 38 2 S serine 8.9 68 4 T threonine 4.5 34 1 V valine 6.2 47 2 W tryptophan 1.2 9 1 Y tyrosine 1.3 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 zinedin isoform 2 STRN4 0.986 zinedin isoform 1 STRN3 0.481 nuclear autoantigen isoform 1 STRN3 0.480 nuclear autoantigen isoform 2 STRN 0.450 striatin, calmodulin binding protein WDR5 0.049 WD repeat domain 5 WDR5 0.049 WD repeat domain 5 LOC100133284 0.047 PREDICTED: similar to hCG1791648 LOC100133284 0.047 PREDICTED: similar to hCG1791648 LOC100133284 0.047 PREDICTED: similar to hCG1791648 WDR5B 0.042 WD repeat domain 5B WDR51A 0.041 WD repeat domain 51A isoform 2 WDR51A 0.041 WD repeat domain 51A isoform 1 PAFAH1B1 0.040 platelet-activating factor acetylhydrolase, isoform I... PLRG1 0.039 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... WDR51B 0.036 WD repeat domain 51B WDR69 0.036 WD repeat domain 69 COPA 0.036 coatomer protein complex, subunit alpha isoform 1 [... COPA 0.036 coatomer protein complex, subunit alpha isoform 2 [... SNRNP40 0.036 WD repeat domain 57 (U5 snRNP specific) TEP1 0.035 telomerase-associated protein 1 TAF5L 0.034 PCAF associated factor 65 beta isoform a SMU1 0.032 smu-1 suppressor of mec-8 and unc-52 homolog PRPF4 0.032 PRP4 pre-mRNA processing factor 4 homolog WDR51A 0.032 WD repeat domain 51A isoform 3 NLE1 0.032 Notchless gene homolog isoform a TBL3 0.031 transducin beta-like 3 SPAG16 0.030 sperm associated antigen 16 isoform 1 WDR61 0.030 WD repeat domain 61 WDR38 0.030 WD repeat domain 38 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.