STRN 31840

Name: STRN	Sequence: fasta or formatted (780aa)		NCBI GI: 51242945
Description: striatin, calmodulin binding protein		Referenced in: Calmodulin and Calcium WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 71 4 C cysteine 1.0 8 1 D aspartate 7.6 59 3 E glutamate 7.8 61 2 F phenylalanine 3.2 25 2 G glycine 6.5 51 2 H histidine 2.7 21 1 I isoleucine 3.8 30 1 K lysine 6.4 50 2 L leucine 9.2 72 2 M methionine 1.8 14 1 N asparagine 4.2 33 2 P proline 4.4 34 2 Q glutamine 4.1 32 2 R arginine 4.6 36 2 S serine 8.6 67 3 T threonine 5.5 43 2 V valine 5.6 44 2 W tryptophan 1.4 11 1 Y tyrosine 2.3 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 striatin, calmodulin binding protein STRN3 0.632 nuclear autoantigen isoform 1 STRN3 0.493 nuclear autoantigen isoform 2 STRN4 0.443 zinedin isoform 2 STRN4 0.443 zinedin isoform 1 LOC100133284 0.061 PREDICTED: similar to hCG1791648 LOC100133284 0.061 PREDICTED: similar to hCG1791648 LOC100133284 0.060 PREDICTED: similar to hCG1791648 SNRNP40 0.038 WD repeat domain 57 (U5 snRNP specific) WDR51A 0.038 WD repeat domain 51A isoform 2 WDR51A 0.038 WD repeat domain 51A isoform 1 COPA 0.036 coatomer protein complex, subunit alpha isoform 1 [... COPA 0.036 coatomer protein complex, subunit alpha isoform 2 [... PAFAH1B1 0.035 platelet-activating factor acetylhydrolase, isoform I... WDR69 0.035 WD repeat domain 69 TBL1XR1 0.033 transducin (beta)-like 1 X-linked receptor 1 GNB2L1 0.033 guanine nucleotide binding protein (G protein), beta ... PLRG1 0.032 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... WDR51B 0.032 WD repeat domain 51B TAF5 0.031 TBP-associated factor 5 TBL1X 0.031 transducin beta-like 1X isoform b TBL1X 0.031 transducin beta-like 1X isoform b TBL1X 0.031 transducin beta-like 1X isoform a TBL1X 0.031 transducin beta-like 1X isoform a WDR5 0.031 WD repeat domain 5 WDR5 0.031 WD repeat domain 5 TEP1 0.029 telomerase-associated protein 1 TAF5L 0.029 PCAF associated factor 65 beta isoform a NLE1 0.029 Notchless gene homolog isoform a WDR61 0.029 WD repeat domain 61 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.