PLRG1 29166

Name: PLRG1	Sequence: fasta or formatted (514aa)		NCBI GI: 4505895
Description: pleiotropic regulator 1 (PRL1 homolog, Arabidopsis)		Referenced in: Capping and Splicing WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 41 2 C cysteine 1.2 6 1 D aspartate 5.3 27 2 E glutamate 4.5 23 2 F phenylalanine 2.3 12 1 G glycine 6.2 32 1 H histidine 4.9 25 1 I isoleucine 4.5 23 2 K lysine 6.6 34 2 L leucine 6.8 35 2 M methionine 1.9 10 1 N asparagine 3.9 20 1 P proline 6.0 31 2 Q glutamine 3.7 19 1 R arginine 5.4 28 1 S serine 7.8 40 1 T threonine 8.0 41 2 V valine 8.0 41 2 W tryptophan 2.3 12 1 Y tyrosine 2.7 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... WDR5 0.110 WD repeat domain 5 WDR5 0.110 WD repeat domain 5 WDR5B 0.108 WD repeat domain 5B KATNB1 0.101 katanin p80 subunit B 1 PAFAH1B1 0.100 platelet-activating factor acetylhydrolase, isoform I... WDR69 0.100 WD repeat domain 69 FBXW7 0.097 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.097 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.097 F-box and WD repeat domain containing 7 isoform 2 [H... WDR38 0.094 WD repeat domain 38 PRPF4 0.082 PRP4 pre-mRNA processing factor 4 homolog WDR51A 0.076 WD repeat domain 51A isoform 3 WDR51A 0.076 WD repeat domain 51A isoform 2 WDR51A 0.076 WD repeat domain 51A isoform 1 WDR86 0.075 WD repeat domain 86 TAF5L 0.074 PCAF associated factor 65 beta isoform a WDR51B 0.074 WD repeat domain 51B BTRC 0.073 beta-transducin repeat containing protein isoform 2 [... BTRC 0.073 beta-transducin repeat containing protein isoform 1 ... SPAG16 0.072 sperm associated antigen 16 isoform 1 FBXW11 0.072 F-box and WD repeat domain containing 11 isoform C [... FBXW11 0.072 F-box and WD repeat domain containing 11 isoform A [... FBXW11 0.072 F-box and WD repeat domain containing 11 isoform B [... TAF5 0.071 TBP-associated factor 5 TBL1XR1 0.070 transducin (beta)-like 1 X-linked receptor 1 SNRNP40 0.069 WD repeat domain 57 (U5 snRNP specific) TBL1X 0.068 transducin beta-like 1X isoform b TBL1X 0.068 transducin beta-like 1X isoform b TBL1X 0.068 transducin beta-like 1X isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.