PRPF4 23854

Name: PRPF4	Sequence: fasta or formatted (522aa)		NCBI GI: 24431950
Description: PRP4 pre-mRNA processing factor 4 homolog		Referenced in: Capping and Splicing WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 38 2 C cysteine 2.3 12 1 D aspartate 5.6 29 2 E glutamate 7.5 39 2 F phenylalanine 2.7 14 1 G glycine 8.0 42 2 H histidine 3.8 20 1 I isoleucine 5.2 27 1 K lysine 6.5 34 2 L leucine 9.2 48 2 M methionine 1.7 9 1 N asparagine 3.6 19 2 P proline 3.8 20 1 Q glutamine 2.7 14 2 R arginine 6.3 33 2 S serine 7.7 40 2 T threonine 5.9 31 2 V valine 5.2 27 2 W tryptophan 2.5 13 1 Y tyrosine 2.5 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PRP4 pre-mRNA processing factor 4 homolog WDR69 0.130 WD repeat domain 69 WDR5B 0.106 WD repeat domain 5B WDR5 0.105 WD repeat domain 5 WDR5 0.105 WD repeat domain 5 WDR51B 0.101 WD repeat domain 51B PAFAH1B1 0.100 platelet-activating factor acetylhydrolase, isoform I... FBXW7 0.092 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.092 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.092 F-box and WD repeat domain containing 7 isoform 2 [H... GNB4 0.091 guanine nucleotide-binding protein, beta-4 subunit [... GNB2 0.089 guanine nucleotide-binding protein, beta-2 subunit [... GNB1 0.087 guanine nucleotide-binding protein, beta-1 subunit [... KATNB1 0.086 katanin p80 subunit B 1 SPAG16 0.086 sperm associated antigen 16 isoform 1 PRPF19 0.085 PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom... GNB3 0.083 guanine nucleotide-binding protein, beta-3 subunit [H... TAF5 0.083 TBP-associated factor 5 WDR38 0.081 WD repeat domain 38 PLRG1 0.081 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... WDR51A 0.080 WD repeat domain 51A isoform 2 WDR51A 0.080 WD repeat domain 51A isoform 1 TBL1XR1 0.077 transducin (beta)-like 1 X-linked receptor 1 WDR51A 0.076 WD repeat domain 51A isoform 3 SNRNP40 0.075 WD repeat domain 57 (U5 snRNP specific) GNB5 0.074 guanine nucleotide-binding protein, beta-5 subunit is... GNB5 0.074 guanine nucleotide-binding protein, beta-5 subunit i... WDR61 0.072 WD repeat domain 61 TBL1X 0.071 transducin beta-like 1X isoform b TBL1X 0.071 transducin beta-like 1X isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.