STRN3 3992

Name: STRN3	Sequence: fasta or formatted (797aa)		NCBI GI: 142976686
Description: nuclear autoantigen isoform 1		Referenced in: Calmodulin and Calcium
Other entries for this name: alt prot [713aa] nuclear autoantigen isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 62 2 C cysteine 0.9 7 1 D aspartate 7.5 60 2 E glutamate 7.2 57 2 F phenylalanine 2.5 20 2 G glycine 9.3 74 6 H histidine 3.0 24 1 I isoleucine 4.8 38 2 K lysine 6.3 50 2 L leucine 8.9 71 2 M methionine 1.9 15 1 N asparagine 4.1 33 2 P proline 5.1 41 2 Q glutamine 4.1 33 3 R arginine 4.1 33 2 S serine 7.5 60 2 T threonine 5.6 45 1 V valine 5.1 41 2 W tryptophan 1.5 12 2 Y tyrosine 2.6 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear autoantigen isoform 1 STRN3 0.628 nuclear autoantigen isoform 2 STRN 0.610 striatin, calmodulin binding protein STRN4 0.456 zinedin isoform 2 STRN4 0.453 zinedin isoform 1 LOC100133284 0.052 PREDICTED: similar to hCG1791648 LOC100133284 0.052 PREDICTED: similar to hCG1791648 LOC100133284 0.051 PREDICTED: similar to hCG1791648 PAFAH1B1 0.043 platelet-activating factor acetylhydrolase, isoform I... WDR69 0.043 WD repeat domain 69 WDR51B 0.041 WD repeat domain 51B PLRG1 0.039 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... WDR5B 0.038 WD repeat domain 5B TBL1XR1 0.036 transducin (beta)-like 1 X-linked receptor 1 TBL1X 0.036 transducin beta-like 1X isoform b TBL1X 0.036 transducin beta-like 1X isoform b TBL1X 0.036 transducin beta-like 1X isoform a TBL1X 0.036 transducin beta-like 1X isoform a COPA 0.036 coatomer protein complex, subunit alpha isoform 1 [... COPA 0.036 coatomer protein complex, subunit alpha isoform 2 [... SNRNP40 0.035 WD repeat domain 57 (U5 snRNP specific) WDR5 0.034 WD repeat domain 5 WDR5 0.034 WD repeat domain 5 TBL1Y 0.034 transducin beta-like 1Y TBL1Y 0.034 transducin beta-like 1Y TBL1Y 0.034 transducin beta-like 1Y FBXW7 0.033 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.033 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.033 F-box and WD repeat domain containing 7 isoform 2 [H... SPAG16 0.033 sperm associated antigen 16 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.