TCF7 11561

Name: TCF7	Sequence: fasta or formatted (366aa)		NCBI GI: 198442849
Description: transcription factor 7 (T-cell specific, HMG-box) 5		Referenced in: SOX Family T cells
Other entries for this name: alt prot [250aa] transcription factor 7 (T-cell specific, HMG-box) 6 alt prot [269aa] transcription factor 7 (T-cell specific, HMG-box) isoform 3 alt prot [269aa] transcription factor 7 (T-cell specific, HMG-box) isoform 2 alt prot [384aa] transcription factor 7 (T-cell specific, HMG-box) isoform 1 alt prot [268aa] transcription factor 7 (T-cell specific, HMG-box) isoform 4 alt prot [269aa] transcription factor 7 (T-cell specific, HMG-box) isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 28 2 C cysteine 1.9 7 1 D aspartate 2.5 9 2 E glutamate 5.2 19 2 F phenylalanine 2.2 8 1 G glycine 6.0 22 1 H histidine 4.1 15 1 I isoleucine 2.2 8 1 K lysine 6.8 25 3 L leucine 8.7 32 2 M methionine 2.2 8 1 N asparagine 2.2 8 1 P proline 13.7 50 3 Q glutamine 7.7 28 3 R arginine 5.7 21 2 S serine 9.0 33 1 T threonine 5.2 19 2 V valine 2.7 10 1 W tryptophan 1.1 4 1 Y tyrosine 3.3 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription factor 7 (T-cell specific, HMG-box) 5... TCF7 0.730 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.656 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.653 transcription factor 7 (T-cell specific, HMG-box) 6... TCF7 0.651 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.651 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.651 transcription factor 7 (T-cell specific, HMG-box) is... TCF7L2 0.391 transcription factor 7-like 2 isoform 5 TCF7L2 0.382 transcription factor 7-like 2 isoform 1 TCF7L2 0.379 transcription factor 7-like 2 isoform 2 LEF1 0.297 lymphoid enhancer-binding factor 1 isoform 2 LEF1 0.294 lymphoid enhancer-binding factor 1 isoform 3 TCF7L1 0.284 HMG-box transcription factor TCF-3 LEF1 0.280 lymphoid enhancer-binding factor 1 isoform 1 TCF7L2 0.280 transcription factor 7-like 2 isoform 4 TCF7L2 0.276 transcription factor 7-like 2 isoform 6 TCF7L2 0.276 transcription factor 7-like 2 isoform 3 CIC 0.063 capicua homolog SOX6 0.054 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.054 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.054 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.054 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SOX18 0.051 SRY-box 18 SOX30 0.048 SRY (sex determining region Y)-box 30 isoform a [Hom... SOX5 0.047 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX5 0.047 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.047 SRY (sex determining region Y)-box 5 isoform a [Homo... SOX30 0.047 SRY (sex determining region Y)-box 30 isoform b [Homo... SOX13 0.043 SRY-box 13 SOX2 0.042 sex-determining region Y-box 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.