BBX 13588

Name: BBX	Sequence: fasta or formatted (941aa)		NCBI GI: 217035121
Description: HMG-BOX transcription factor BBX isoform 1		Referenced in: SOX Family
Other entries for this name: alt prot [911aa] HMG-BOX transcription factor BBX isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 57 2 C cysteine 2.0 19 1 D aspartate 6.0 56 2 E glutamate 9.8 92 6 F phenylalanine 3.0 28 2 G glycine 5.6 53 2 H histidine 2.3 22 1 I isoleucine 3.6 34 3 K lysine 13.2 124 6 L leucine 6.7 63 3 M methionine 2.6 24 1 N asparagine 3.0 28 1 P proline 6.8 64 2 Q glutamine 3.4 32 1 R arginine 4.8 45 2 S serine 10.3 97 3 T threonine 5.6 53 3 V valine 3.5 33 1 W tryptophan 1.0 9 2 Y tyrosine 0.9 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HMG-BOX transcription factor BBX isoform 1 BBX 0.958 HMG-BOX transcription factor BBX isoform 2 CIC 0.045 capicua homolog SOX7 0.020 SRY-box 7 HMGB2 0.019 high-mobility group box 2 HMGB2 0.019 high-mobility group box 2 HMGB2 0.019 high-mobility group box 2 SOX14 0.019 SRY-box 14 SOX17 0.019 SRY-box 17 SOX18 0.019 SRY-box 18 SOX1 0.018 SRY (sex determining region Y)-box 1 SOX21 0.018 SRY-box 21 SOX2 0.018 sex-determining region Y-box 2 SOX15 0.016 SRY-box 15 TRDN 0.016 triadin SOX3 0.016 SRY (sex determining region Y)-box 3 SOX9 0.015 transcription factor SOX9 MPHOSPH8 0.015 M-phase phosphoprotein 8 HBP1 0.015 HMG-box transcription factor 1 TCF7L2 0.015 transcription factor 7-like 2 isoform 5 NEFH 0.015 neurofilament, heavy polypeptide 200kDa SOX8 0.014 SRY (sex determining region Y)-box 8 TCF7L2 0.014 transcription factor 7-like 2 isoform 2 SOX10 0.014 SRY (sex determining region Y)-box 10 SOX6 0.014 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.014 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.014 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.014 SRY (sex determining region Y)-box 6 isoform 2 [Homo... PNN 0.014 pinin, desmosome associated protein SOX5 0.013 SRY (sex determining region Y)-box 5 isoform c [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.