TRIOBP 36667

Name: TRIOBP	Sequence: fasta or formatted (2365aa)		NCBI GI: 88501738
Description: TRIO and F-actin binding protein isoform 6		Referenced in: Myosin Additional Serine / Threonine Protein Kinases
Other entries for this name: alt prot [652aa] TRIO and F-actin binding protein isoform 1 alt prot [431aa] TRIO and F-actin binding protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 192 2 C cysteine 2.2 51 2 D aspartate 4.9 117 2 E glutamate 7.4 176 3 F phenylalanine 1.2 29 2 G glycine 5.5 130 4 H histidine 2.1 50 2 I isoleucine 1.6 38 1 K lysine 2.5 59 2 L leucine 6.7 159 2 M methionine 0.8 18 2 N asparagine 3.6 84 2 P proline 11.4 269 3 Q glutamine 7.4 174 2 R arginine 11.1 262 2 S serine 12.1 285 3 T threonine 6.9 163 3 V valine 2.2 51 2 W tryptophan 1.4 33 2 Y tyrosine 1.1 25 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TRIO and F-actin binding protein isoform 6 TRIOBP 0.238 TRIO and F-actin binding protein isoform 1 TRIOBP 0.135 TRIO and F-actin binding protein isoform 2 MPRIP 0.093 myosin phosphatase-Rho interacting protein isoform 2... MPRIP 0.093 myosin phosphatase-Rho interacting protein isoform 1... SRRM2 0.030 splicing coactivator subunit SRm300 LOC100170229 0.027 hypothetical protein LOC100170229 LOC100133756 0.022 PREDICTED: hypothetical protein, partial NACA 0.016 nascent polypeptide-associated complex alpha subuni... DSPP 0.016 dentin sialophosphoprotein preproprotein PRG4 0.016 proteoglycan 4 isoform D PRG4 0.016 proteoglycan 4 isoform C SRRM1 0.016 serine/arginine repetitive matrix 1 LOC100292293 0.015 PREDICTED: similar to apopolysialoglycoprotein [Hom... MUC6 0.015 mucin 6, gastric PRG4 0.014 proteoglycan 4 isoform B PRG4 0.014 proteoglycan 4 isoform A FLJ22184 0.014 PREDICTED: hypothetical protein FLJ22184 MDC1 0.014 mediator of DNA-damage checkpoint 1 MUC12 0.014 PREDICTED: mucin 12 MUC17 0.013 mucin 17 FLJ22184 0.013 PREDICTED: hypothetical protein FLJ22184 DPCR1 0.012 diffuse panbronchiolitis critical region 1 protein ... MUC12 0.012 PREDICTED: mucin 12, cell surface associated ZC3H13 0.012 zinc finger CCCH-type containing 13 LOC100294236 0.012 PREDICTED: similar to diffuse panbronchiolitis crit... MLL2 0.012 myeloid/lymphoid or mixed-lineage leukemia 2 LOC100133280 0.011 PREDICTED: similar to Putative POM121-like protein ... LOC729815 0.011 PREDICTED: hypothetical protein LOC729915 0.011 PREDICTED: similar to Putative POM121-like protein ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.