| Name: LOC100170229 | Sequence: fasta or formatted (715aa) | NCBI GI: 224548936 | |
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Description: hypothetical protein LOC100170229
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 3.9 28 1 C cysteine 0.6 4 1 D aspartate 3.4 24 2 E glutamate 3.6 26 2 F phenylalanine 0.1 1 1 G glycine 4.3 31 2 H histidine 3.2 23 1 I isoleucine 0.8 6 2 K lysine 7.8 56 2 L leucine 1.5 11 1 M methionine 1.1 8 1 N asparagine 2.8 20 1 P proline 8.5 61 2 Q glutamine 4.3 31 2 R arginine 18.6 133 3 S serine 26.4 189 6 T threonine 5.6 40 2 V valine 1.5 11 1 W tryptophan 0.6 4 1 Y tyrosine 1.1 8 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC100170229 SRRM2 0.140 splicing coactivator subunit SRm300 SFRS4 0.108 splicing factor, arginine/serine-rich 4 PPIG 0.100 peptidylprolyl isomerase G C2orf16 0.096 hypothetical protein LOC84226 SRRM1 0.095 serine/arginine repetitive matrix 1 TRIOBP 0.094 TRIO and F-actin binding protein isoform 6 ZC3H13 0.094 zinc finger CCCH-type containing 13 SFRS12 0.091 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.091 splicing factor, arginine/serine-rich 12 isoform b [... LOC100286959 0.085 PREDICTED: hypothetical protein XP_002343921 PRPF38B 0.084 PRP38 pre-mRNA processing factor 38 (yeast) domain ... DSPP 0.081 dentin sialophosphoprotein preproprotein KIAA1853 0.072 KIAA1853 protein SFRS18 0.071 splicing factor, arginine/serine-rich 130 SFRS18 0.071 splicing factor, arginine/serine-rich 130 FLJ37078 0.069 hypothetical protein LOC222183 NEFH 0.067 neurofilament, heavy polypeptide 200kDa NKTR 0.066 natural killer-tumor recognition sequence SFRS16 0.066 splicing factor, arginine/serine-rich 16 RSRC2 0.061 arginine/serine-rich coiled-coil 2 isoform a RBM25 0.060 RNA binding motif protein 25 SON 0.060 SON DNA-binding protein isoform F SON 0.060 SON DNA-binding protein isoform B SFRS11 0.060 splicing factor, arginine/serine-rich 11 PRPF4B 0.058 serine/threonine-protein kinase PRP4K CDC2L5 0.057 cell division cycle 2-like 5 isoform 1 CDC2L5 0.057 cell division cycle 2-like 5 isoform 2 LOC100131202 0.056 PREDICTED: hypothetical protein LOC100288837 0.054 PREDICTED: hypothetical protein XP_002343931, parti...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
