LOC100292293 21814

Name: LOC100292293	Sequence: fasta or formatted (538aa)		NCBI GI: 239753963
Description: PREDICTED: similar to apopolysialoglycoprotein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 20.6 111 2 C cysteine 0.0 0 0 D aspartate 11.0 59 1 E glutamate 8.2 44 1 F phenylalanine 0.0 0 0 G glycine 0.0 0 0 H histidine 4.3 23 1 I isoleucine 0.6 3 1 K lysine 0.0 0 0 L leucine 0.2 1 1 M methionine 6.7 36 1 N asparagine 0.0 0 0 P proline 7.8 42 1 Q glutamine 7.6 41 1 R arginine 15.2 82 2 S serine 7.8 42 1 T threonine 7.8 42 2 V valine 2.2 12 1 W tryptophan 0.0 0 0 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to apopolysialoglycoprotein [Hom... TRIOBP 0.071 TRIO and F-actin binding protein isoform 6 KIAA0754 0.055 hypothetical protein LOC643314 LOC100293727 0.048 PREDICTED: hypothetical protein LOC100287547 0.048 PREDICTED: hypothetical protein PRG4 0.035 proteoglycan 4 isoform D PRG4 0.035 proteoglycan 4 isoform C PRG4 0.035 proteoglycan 4 isoform B PRG4 0.035 proteoglycan 4 isoform A SRRM2 0.035 splicing coactivator subunit SRm300 FLG 0.033 filaggrin MAP7D1 0.030 MAP7 domain containing 1 ZC3H13 0.029 zinc finger CCCH-type containing 13 TCHH 0.029 trichohyalin PLEC1 0.029 plectin 1 isoform 11 PLEC1 0.029 plectin 1 isoform 10 PLEC1 0.029 plectin 1 isoform 8 PLEC1 0.029 plectin 1 isoform 7 PLEC1 0.029 plectin 1 isoform 6 PLEC1 0.029 plectin 1 isoform 3 PLEC1 0.029 plectin 1 isoform 2 PLEC1 0.029 plectin 1 isoform 1 RGAG1 0.026 retrotransposon gag domain containing 1 RP1L1 0.026 retinitis pigmentosa 1-like 1 INCENP 0.020 inner centromere protein antigens 135/155kDa isofor... TTC16 0.020 tetratricopeptide repeat domain 16 LOC100293596 0.020 PREDICTED: similar to mucin SETD1B 0.020 SET domain containing 1B SRRM1 0.020 serine/arginine repetitive matrix 1 INCENP 0.019 inner centromere protein antigens 135/155kDa isofor... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.