LOC100133280 17289

Name: LOC100133280	Sequence: fasta or formatted (897aa)		NCBI GI: 239742580
Description: PREDICTED: similar to Putative POM121-like protein 1-like		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.7 105 6 C cysteine 1.7 15 1 D aspartate 4.5 40 2 E glutamate 3.0 27 1 F phenylalanine 2.1 19 3 G glycine 6.9 62 2 H histidine 2.9 26 1 I isoleucine 1.6 14 1 K lysine 3.1 28 2 L leucine 7.7 69 2 M methionine 0.9 8 1 N asparagine 2.3 21 2 P proline 10.4 93 3 Q glutamine 4.5 40 2 R arginine 8.8 79 3 S serine 15.9 143 6 T threonine 7.0 63 1 V valine 3.7 33 1 W tryptophan 0.3 3 1 Y tyrosine 1.0 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to Putative POM121-like protein ... LOC729915 0.928 PREDICTED: similar to Putative POM121-like protein ... LOC100294020 0.272 PREDICTED: similar to POM121-like 1, partial POM121C 0.078 POM121 membrane glycoprotein (rat)-like POM121 0.077 nuclear pore membrane protein 121 LOC100292653 0.064 PREDICTED: similar to hCG1998564 LOC100288540 0.045 PREDICTED: hypothetical protein XP_002342775 POM121L2 0.043 POM121 membrane glycoprotein-like 2 TRIOBP 0.031 TRIO and F-actin binding protein isoform 6 MUC12 0.031 PREDICTED: mucin 12 MUC12 0.028 PREDICTED: mucin 12 MUC4 0.028 mucin 4 isoform a MUC12 0.026 PREDICTED: mucin 12, cell surface associated C15orf2 0.026 hypothetical protein LOC23742 MUC17 0.026 mucin 17 LOC100133714 0.025 PREDICTED: similar to Mucin-12, partial FLJ22184 0.024 PREDICTED: hypothetical protein FLJ22184 TNS1 0.024 tensin SRRM2 0.023 splicing coactivator subunit SRm300 MUC12 0.020 PREDICTED: mucin 12 MUC6 0.019 mucin 6, gastric LOC100130716 0.018 PREDICTED: similar to mucin 11 MED1 0.018 mediator complex subunit 1 LOC100133756 0.017 PREDICTED: hypothetical protein, partial WNK1 0.015 WNK lysine deficient protein kinase 1 LOC100130716 0.015 PREDICTED: similar to Mucin-12 TNRC18 0.015 trinucleotide repeat containing 18 MBD6 0.015 methyl-CpG binding domain protein 6 MUC5AC 0.015 mucin 5AC SAMD1 0.014 sterile alpha motif domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.