CDC40 36207

Name: CDC40	Sequence: fasta or formatted (579aa)		NCBI GI: 7706657
Description: cell division cycle 40 homolog		Referenced in: Additional Cell Cycle Functions Capping and Splicing WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 41 2 C cysteine 2.1 12 1 D aspartate 6.6 38 2 E glutamate 6.9 40 3 F phenylalanine 4.1 24 1 G glycine 6.2 36 1 H histidine 2.8 16 1 I isoleucine 4.5 26 1 K lysine 8.6 50 3 L leucine 6.6 38 3 M methionine 2.6 15 1 N asparagine 3.6 21 1 P proline 5.0 29 2 Q glutamine 4.0 23 2 R arginine 4.3 25 2 S serine 7.9 46 2 T threonine 4.7 27 2 V valine 6.6 38 1 W tryptophan 2.2 13 1 Y tyrosine 3.6 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cell division cycle 40 homolog WDR25 0.106 WD repeat domain 25 WDR25 0.106 WD repeat domain 25 WDR5 0.091 WD repeat domain 5 WDR5 0.091 WD repeat domain 5 WDR5B 0.086 WD repeat domain 5B SNRNP40 0.071 WD repeat domain 57 (U5 snRNP specific) WDR51A 0.056 WD repeat domain 51A isoform 3 PRPF19 0.055 PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom... WDR51B 0.053 WD repeat domain 51B APAF1 0.052 apoptotic peptidase activating factor 1 isoform d [H... APAF1 0.052 apoptotic peptidase activating factor 1 isoform b [Ho... WDR69 0.050 WD repeat domain 69 FBXW7 0.050 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.050 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.050 F-box and WD repeat domain containing 7 isoform 2 [H... WDR51A 0.050 WD repeat domain 51A isoform 2 WDR51A 0.050 WD repeat domain 51A isoform 1 ATG16L2 0.050 ATG16 autophagy related 16-like 2 PAFAH1B1 0.050 platelet-activating factor acetylhydrolase, isoform I... KATNB1 0.049 katanin p80 subunit B 1 WDR38 0.049 WD repeat domain 38 SMU1 0.049 smu-1 suppressor of mec-8 and unc-52 homolog GNB5 0.049 guanine nucleotide-binding protein, beta-5 subunit is... GNB5 0.049 guanine nucleotide-binding protein, beta-5 subunit i... WDR3 0.048 WD repeat-containing protein 3 TAF5L 0.048 PCAF associated factor 65 beta isoform a ATG16L1 0.046 APG16 autophagy 16-like isoform 2 MORG1 0.046 mitogen-activated protein kinase organizer 1 MORG1 0.046 mitogen-activated protein kinase organizer 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.