APAF1 28268

Name: APAF1	Sequence: fasta or formatted (1194aa)		NCBI GI: 4502123
Description: apoptotic peptidase activating factor 1 isoform b		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death WD Repeat Proteins
Other entries for this name: alt prot [1248aa] apoptotic peptidase activating factor 1 isoform c alt prot [1205aa] apoptotic peptidase activating factor 1 isoform d alt prot [338aa] apoptotic peptidase activating factor 1 isoform e alt prot [1237aa] apoptotic peptidase activating factor 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 63 2 C cysteine 3.3 39 3 D aspartate 7.0 83 2 E glutamate 6.4 76 3 F phenylalanine 4.0 48 2 G glycine 4.9 59 2 H histidine 3.6 43 2 I isoleucine 5.2 62 2 K lysine 7.4 88 2 L leucine 11.2 134 3 M methionine 2.2 26 1 N asparagine 4.3 51 2 P proline 2.4 29 1 Q glutamine 4.6 55 3 R arginine 3.9 47 2 S serine 8.0 95 4 T threonine 4.9 59 2 V valine 7.0 83 2 W tryptophan 2.2 26 2 Y tyrosine 2.3 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apoptotic peptidase activating factor 1 isoform b [Ho... APAF1 0.997 apoptotic peptidase activating factor 1 isoform d [H... APAF1 0.991 apoptotic peptidase activating factor 1 isoform a [Ho... APAF1 0.988 apoptotic peptidase activating factor 1 isoform c [H... APAF1 0.240 apoptotic peptidase activating factor 1 isoform e [H... WDR69 0.038 WD repeat domain 69 WDR5B 0.038 WD repeat domain 5B SNRNP40 0.037 WD repeat domain 57 (U5 snRNP specific) SPAG16 0.037 sperm associated antigen 16 isoform 1 PAFAH1B1 0.037 platelet-activating factor acetylhydrolase, isoform I... WDR5 0.037 WD repeat domain 5 WDR5 0.037 WD repeat domain 5 WDR51B 0.033 WD repeat domain 51B TEP1 0.033 telomerase-associated protein 1 WDR38 0.033 WD repeat domain 38 TAF5L 0.032 PCAF associated factor 65 beta isoform a NLE1 0.032 Notchless gene homolog isoform a GNB2L1 0.031 guanine nucleotide binding protein (G protein), beta ... WDR51A 0.031 WD repeat domain 51A isoform 2 WDR51A 0.031 WD repeat domain 51A isoform 1 WDR88 0.031 PQQ repeat and WD repeat domain containing STRAP 0.030 serine/threonine kinase receptor associated protein... FBXW7 0.029 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.029 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.029 F-box and WD repeat domain containing 7 isoform 2 [H... WDR51A 0.027 WD repeat domain 51A isoform 3 WDSUB1 0.027 WD repeat, sterile alpha motif and U-box domain con... WDSUB1 0.027 WD repeat, sterile alpha motif and U-box domain con... WDSUB1 0.027 WD repeat, sterile alpha motif and U-box domain con... TAF5 0.027 TBP-associated factor 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.