Guide to the Human Genome
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Name: FBXW7 Sequence: fasta or formatted (589aa) NCBI GI: 61743926
Description:

F-box and WD repeat domain containing 7 isoform 3

Referenced in:

Cullins and SCF Complexes
WD Repeat Proteins

Other entries for this name:
alt prot [627aa] F-box and WD repeat domain containing 7 isoform 2
alt prot [707aa] F-box and WD repeat domain containing 7 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         21           2
 C cysteine            3.1         18           1
 D aspartate           5.6         33           2
 E glutamate           4.8         28           2
 F phenylalanine       2.7         16           1
 G glycine             7.8         46           2
 H histidine           3.7         22           1
 I isoleucine          5.3         31           3
 K lysine              6.6         39           2
 L leucine             9.8         58           2
 M methionine          2.0         12           2
 N asparagine          3.1         18           1
 P proline             3.7         22           2
 Q glutamine           4.6         27           2
 R arginine            6.1         36           3
 S serine              7.6         45           2
 T threonine           7.8         46           2
 V valine              8.1         48           2
 W tryptophan          2.5         15           1
 Y tyrosine            1.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and WD repeat domain containing 7 isoform 3 [H... 
FBXW7                 0.918   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.918   F-box and WD repeat domain containing 7 isoform 2 [H...
FBXW11                0.182   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.182   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.182   F-box and WD repeat domain containing 11 isoform B [...
BTRC                  0.178   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.178   beta-transducin repeat containing protein isoform 1 ...
WDR69                 0.134   WD repeat domain 69 
WDR5                  0.121   WD repeat domain 5 
WDR5                  0.121   WD repeat domain 5 
PAFAH1B1              0.116   platelet-activating factor acetylhydrolase, isoform I...
WDR86                 0.115   WD repeat domain 86 
WDR5B                 0.113   WD repeat domain 5B 
TRAF7                 0.092   TNF receptor-associated factor 7 
WDR51A                0.088   WD repeat domain 51A isoform 2 
WDR51A                0.088   WD repeat domain 51A isoform 1 
PLRG1                 0.084   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
FBXW10                0.084   F-box and WD-40 domain protein 10 
PRPF4                 0.082   PRP4 pre-mRNA processing factor 4 homolog 
CDRT1                 0.082   CMT1A duplicated region transcript 1 
KATNB1                0.081   katanin p80 subunit B 1 
WDR88                 0.080   PQQ repeat and WD repeat domain containing 
TAF5                  0.078   TBP-associated factor 5 
WDR51A                0.076   WD repeat domain 51A isoform 3 
SNRNP40               0.076   WD repeat domain 57 (U5 snRNP specific) 
TBL1XR1               0.075   transducin (beta)-like 1 X-linked receptor 1 
WDR51B                0.075   WD repeat domain 51B 
TBL1X                 0.074   transducin beta-like 1X isoform b 
TBL1X                 0.074   transducin beta-like 1X isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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