Guide to the Human Genome
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Name: FBXW7 Sequence: fasta or formatted (627aa) NCBI GI: 16117779
Description:

F-box and WD repeat domain containing 7 isoform 2

Referenced in:

Cullins and SCF Complexes
WD Repeat Proteins

Other entries for this name:
alt prot [707aa] F-box and WD repeat domain containing 7 isoform 1
alt prot [589aa] F-box and WD repeat domain containing 7 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         19           2
 C cysteine            3.7         23           1
 D aspartate           5.1         32           2
 E glutamate           4.9         31           2
 F phenylalanine       2.7         17           1
 G glycine             8.1         51           2
 H histidine           3.3         21           1
 I isoleucine          4.8         30           3
 K lysine              6.2         39           2
 L leucine            11.0         69           2
 M methionine          2.2         14           2
 N asparagine          3.2         20           1
 P proline             3.5         22           2
 Q glutamine           4.1         26           2
 R arginine            5.7         36           3
 S serine              7.8         49           2
 T threonine           8.1         51           2
 V valine              7.8         49           2
 W tryptophan          2.4         15           1
 Y tyrosine            2.1         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and WD repeat domain containing 7 isoform 2 [H... 
FBXW7                 0.860   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.859   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW11                0.170   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.170   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.170   F-box and WD repeat domain containing 11 isoform B [...
BTRC                  0.167   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.167   beta-transducin repeat containing protein isoform 1 ...
WDR69                 0.125   WD repeat domain 69 
WDR5                  0.113   WD repeat domain 5 
WDR5                  0.113   WD repeat domain 5 
PAFAH1B1              0.109   platelet-activating factor acetylhydrolase, isoform I...
WDR86                 0.108   WD repeat domain 86 
WDR5B                 0.106   WD repeat domain 5B 
TRAF7                 0.086   TNF receptor-associated factor 7 
WDR51A                0.083   WD repeat domain 51A isoform 2 
WDR51A                0.083   WD repeat domain 51A isoform 1 
PLRG1                 0.079   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
FBXW10                0.079   F-box and WD-40 domain protein 10 
PRPF4                 0.076   PRP4 pre-mRNA processing factor 4 homolog 
CDRT1                 0.076   CMT1A duplicated region transcript 1 
KATNB1                0.076   katanin p80 subunit B 1 
WDR88                 0.075   PQQ repeat and WD repeat domain containing 
TAF5                  0.073   TBP-associated factor 5 
WDR51A                0.072   WD repeat domain 51A isoform 3 
SNRNP40               0.071   WD repeat domain 57 (U5 snRNP specific) 
TBL1XR1               0.070   transducin (beta)-like 1 X-linked receptor 1 
WDR51B                0.070   WD repeat domain 51B 
TBL1X                 0.069   transducin beta-like 1X isoform b 
TBL1X                 0.069   transducin beta-like 1X isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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