PRPF19 35726

Name: PRPF19	Sequence: fasta or formatted (504aa)		NCBI GI: 7657381
Description: PRP19/PSO4 pre-mRNA processing factor 19 homolog		Referenced in: DNases, Recombination, and DNA Repair Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 40 2 C cysteine 1.6 8 1 D aspartate 5.6 28 2 E glutamate 5.4 27 2 F phenylalanine 3.2 16 1 G glycine 5.8 29 2 H histidine 3.6 18 2 I isoleucine 6.2 31 2 K lysine 6.0 30 2 L leucine 9.9 50 2 M methionine 1.2 6 1 N asparagine 2.8 14 2 P proline 5.2 26 2 Q glutamine 5.0 25 2 R arginine 3.4 17 2 S serine 9.1 46 3 T threonine 7.7 39 2 V valine 7.3 37 3 W tryptophan 1.2 6 1 Y tyrosine 2.2 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom... WDR51A 0.094 WD repeat domain 51A isoform 2 WDR51A 0.094 WD repeat domain 51A isoform 1 KATNB1 0.093 katanin p80 subunit B 1 PRPF4 0.091 PRP4 pre-mRNA processing factor 4 homolog WDR51A 0.088 WD repeat domain 51A isoform 3 WDR69 0.085 WD repeat domain 69 TAF5 0.085 TBP-associated factor 5 WDR5 0.084 WD repeat domain 5 WDR5 0.084 WD repeat domain 5 WDR51B 0.084 WD repeat domain 51B WDR5B 0.077 WD repeat domain 5B WDR38 0.076 WD repeat domain 38 TAF5L 0.073 PCAF associated factor 65 beta isoform a SPAG16 0.073 sperm associated antigen 16 isoform 1 PLRG1 0.070 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... GNB1 0.068 guanine nucleotide-binding protein, beta-1 subunit [... GNB3 0.067 guanine nucleotide-binding protein, beta-3 subunit [H... CDC40 0.065 cell division cycle 40 homolog FBXW7 0.064 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.064 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.064 F-box and WD repeat domain containing 7 isoform 2 [H... SNRNP40 0.064 WD repeat domain 57 (U5 snRNP specific) PAFAH1B1 0.063 platelet-activating factor acetylhydrolase, isoform I... COPA 0.063 coatomer protein complex, subunit alpha isoform 1 [... COPA 0.063 coatomer protein complex, subunit alpha isoform 2 [... GNB2 0.062 guanine nucleotide-binding protein, beta-2 subunit [... WDR61 0.060 WD repeat domain 61 WDR48 0.058 WD repeat domain 48 PWP2 0.058 PWP2 periodic tryptophan protein homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.