ATG16L2 32820

Name: ATG16L2	Sequence: fasta or formatted (619aa)		NCBI GI: 55743108
Description: ATG16 autophagy related 16-like 2		Referenced in: Additional Membrane Functions WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.0 68 3 C cysteine 2.1 13 1 D aspartate 5.0 31 1 E glutamate 7.1 44 4 F phenylalanine 1.8 11 1 G glycine 6.5 40 2 H histidine 2.7 17 1 I isoleucine 2.6 16 3 K lysine 5.2 32 2 L leucine 10.5 65 2 M methionine 0.6 4 1 N asparagine 2.6 16 1 P proline 3.7 23 1 Q glutamine 6.1 38 2 R arginine 9.4 58 2 S serine 6.9 43 2 T threonine 4.2 26 2 V valine 8.1 50 2 W tryptophan 2.1 13 1 Y tyrosine 1.8 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ATG16 autophagy related 16-like 2 ATG16L1 0.322 APG16 autophagy 16-like isoform 1 ATG16L1 0.317 APG16 autophagy 16-like isoform 2 SNRNP40 0.080 WD repeat domain 57 (U5 snRNP specific) WDR5B 0.073 WD repeat domain 5B WDR5 0.065 WD repeat domain 5 WDR5 0.065 WD repeat domain 5 WDR69 0.062 WD repeat domain 69 WDR51A 0.053 WD repeat domain 51A isoform 2 WDR51A 0.053 WD repeat domain 51A isoform 1 WDR51B 0.053 WD repeat domain 51B WDR38 0.050 WD repeat domain 38 CDC40 0.049 cell division cycle 40 homolog NLE1 0.046 Notchless gene homolog isoform a WDR51A 0.045 WD repeat domain 51A isoform 3 TAF5 0.045 TBP-associated factor 5 TAF5L 0.045 PCAF associated factor 65 beta isoform a FBXW7 0.044 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.044 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.044 F-box and WD repeat domain containing 7 isoform 2 [H... PAFAH1B1 0.043 platelet-activating factor acetylhydrolase, isoform I... WDR33 0.042 WD repeat domain 33 isoform 1 MORG1 0.041 mitogen-activated protein kinase organizer 1 MORG1 0.041 mitogen-activated protein kinase organizer 1 WDR31 0.040 WD repeat domain 31 isoform 1 WDR31 0.040 WD repeat domain 31 isoform 3 NSMAF 0.040 neutral sphingomyelinase (N-SMase) activation associ... NSMAF 0.040 neutral sphingomyelinase (N-SMase) activation assoc... GNB2 0.039 guanine nucleotide-binding protein, beta-2 subunit [... KATNB1 0.038 katanin p80 subunit B 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.