CNTN1 24725

Name: CNTN1	Sequence: fasta or formatted (1018aa)		NCBI GI: 28373117
Description: contactin 1 isoform 1 precursor		Referenced in: Neurons
Other entries for this name: alt prot [1007aa] contactin 1 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 73 2 C cysteine 1.5 15 1 D aspartate 5.3 54 2 E glutamate 6.7 68 2 F phenylalanine 3.5 36 1 G glycine 7.2 73 5 H histidine 1.9 19 1 I isoleucine 7.1 72 2 K lysine 5.4 55 3 L leucine 6.7 68 3 M methionine 1.8 18 1 N asparagine 5.5 56 2 P proline 6.7 68 2 Q glutamine 2.3 23 1 R arginine 4.7 48 2 S serine 7.3 74 3 T threonine 5.8 59 2 V valine 7.3 74 2 W tryptophan 2.0 20 1 Y tyrosine 4.4 45 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 contactin 1 isoform 1 precursor CNTN1 0.983 contactin 1 isoform 2 precursor CNTN2 0.465 contactin 2 precursor CNTN5 0.422 contactin 5 isoform short CNTN5 0.421 contactin 5 isoform long CNTN3 0.413 contactin 3 CNTN4 0.412 contactin 4 isoform a precursor CNTN6 0.386 contactin 6 CNTN4 0.287 contactin 4 isoform c precursor NFASC 0.165 neurofascin isoform 3 precursor NFASC 0.165 neurofascin isoform 4 precursor NFASC 0.161 neurofascin isoform 2 precursor L1CAM 0.155 L1 cell adhesion molecule isoform 2 precursor L1CAM 0.155 L1 cell adhesion molecule isoform 1 precursor L1CAM 0.155 L1 cell adhesion molecule isoform 3 precursor [Homo... CHL1 0.155 cell adhesion molecule with homology to L1CAM precur... NFASC 0.151 neurofascin isoform 1 precursor NRCAM 0.139 neuronal cell adhesion molecule isoform B precursor ... NRCAM 0.137 neuronal cell adhesion molecule isoform A precursor ... SDK1 0.124 sidekick 1 SDK2 0.107 sidekick 2 DSCAM 0.097 Down syndrome cell adhesion molecule isoform CHD2-42... NFASC 0.094 neurofascin isoform 6 precursor NFASC 0.094 neurofascin isoform 5 precursor PTPRF 0.085 protein tyrosine phosphatase, receptor type, F isof... PTPRF 0.085 protein tyrosine phosphatase, receptor type, F isof... CNTN4 0.084 contactin 4 isoform b precursor DSCAML1 0.083 Down syndrome cell adhesion molecule like 1 NEO1 0.080 neogenin homolog 1 PTPRD 0.077 protein tyrosine phosphatase, receptor type, D isofo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.