Guide to the Human Genome
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Name: TBKBP1 Sequence: fasta or formatted (615aa) NCBI GI: 7662302
Description:

TBK1 binding protein 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         55           2
 C cysteine            2.6         16           1
 D aspartate           3.6         22           2
 E glutamate           9.4         58           2
 F phenylalanine       2.0         12           1
 G glycine             6.5         40           2
 H histidine           2.3         14           2
 I isoleucine          2.9         18           1
 K lysine              2.8         17           1
 L leucine            10.4         64           2
 M methionine          1.1          7           1
 N asparagine          1.3          8           1
 P proline            12.0         74           7
 Q glutamine           7.3         45           3
 R arginine            8.0         49           3
 S serine              9.6         59           2
 T threonine           2.8         17           1
 V valine              3.3         20           1
 W tryptophan          1.0          6           1
 Y tyrosine            2.3         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TBK1 binding protein 1 
SRRM1                 0.041   serine/arginine repetitive matrix 1 
FMNL1                 0.041   formin-like 1 
WASL                  0.037   Wiskott-Aldrich syndrome gene-like protein 
AZI2                  0.036   5-azacytidine induced 2 isoform a 
WIPF1                 0.036   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.036   WAS/WASL interacting protein family, member 1 
CCDC6                 0.036   coiled-coil domain containing 6 
PRR12                 0.035   proline rich 12 
FLJ22184              0.032   PREDICTED: hypothetical protein FLJ22184 
MLL4                  0.032   myeloid/lymphoid or mixed-lineage leukemia 4 
MUC7                  0.032   mucin 7, secreted precursor 
MUC7                  0.032   mucin 7, secreted precursor 
MUC7                  0.032   mucin 7, secreted precursor 
FLJ22184              0.032   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.032   PREDICTED: hypothetical protein LOC80164 
IRS2                  0.032   insulin receptor substrate 2 
MINK1                 0.032   misshapen/NIK-related kinase isoform 4 
NACA                  0.031   nascent polypeptide-associated complex alpha subuni...
WBP11                 0.031   WW domain binding protein 11 
CASKIN1               0.031   CASK interacting protein 1 
FMN1                  0.030   formin 1 
ARHGAP17              0.030   nadrin isoform 1 
ARHGAP17              0.030   nadrin isoform 2 
SETD1A                0.030   SET domain containing 1A 
RAPH1                 0.030   Ras association and pleckstrin homology domains 1 is...
WIPF3                 0.029   WAS/WASL interacting protein family, member 3 [Homo...
AZI2                  0.029   5-azacytidine induced 2 isoform c 
AZI2                  0.029   5-azacytidine induced 2 isoform b 
WIPF2                 0.029   WIRE protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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