Guide to the Human Genome
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Name: FMNL1 Sequence: fasta or formatted (1100aa) NCBI GI: 33356148
Description:

formin-like 1

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         98           3
 C cysteine            1.2         13           1
 D aspartate           4.7         52           2
 E glutamate           8.8         97           2
 F phenylalanine       3.7         41           2
 G glycine             5.1         56           2
 H histidine           1.2         13           1
 I isoleucine          3.7         41           2
 K lysine              6.1         67           2
 L leucine            11.5        126           2
 M methionine          2.6         29           1
 N asparagine          3.6         40           2
 P proline            10.3        113          11
 Q glutamine           4.7         52           2
 R arginine            5.8         64           2
 S serine              6.6         73           2
 T threonine           4.4         48           2
 V valine              4.8         53           2
 W tryptophan          0.5          5           1
 Y tyrosine            1.7         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   formin-like 1 
FMNL2                 0.535   formin-like 2 
FMNL3                 0.487   formin-like 3 isoform 1 
FMNL3                 0.480   formin-like 3 isoform 2 
DAAM2                 0.134   dishevelled associated activator of morphogenesis 2 ...
DAAM1                 0.131   dishevelled-associated activator of morphogenesis 1 ...
DIAPH2                0.110   diaphanous 2 isoform 12C 
DIAPH2                0.110   diaphanous 2 isoform 156 
INF2                  0.107   inverted formin 2 isoform 2 
INF2                  0.107   inverted formin 2 isoform 1 
DIAPH1                0.101   diaphanous 1 isoform 2 
DIAPH1                0.101   diaphanous 1 isoform 1 
DIAPH3                0.098   diaphanous homolog 3 isoform a 
DIAPH3                0.088   diaphanous homolog 3 isoform b 
FMN1                  0.076   formin 1 
FMN2                  0.072   formin 2 
GRID2IP               0.063   glutamate receptor, ionotropic, delta 2 (Grid2) int...
FHDC1                 0.061   FH2 domain containing 1 
FHOD3                 0.048   formin homology 2 domain containing 3 
FHOD1                 0.043   formin homology 2 domain containing 1 
WASF2                 0.036   WAS protein family, member 2 
WASL                  0.036   Wiskott-Aldrich syndrome gene-like protein 
PRR12                 0.036   proline rich 12 
ENAH                  0.034   enabled homolog isoform a 
ENAH                  0.034   enabled homolog isoform b 
CPSF6                 0.033   cleavage and polyadenylation specific factor 6, 68 ...
SAMD1                 0.032   sterile alpha motif domain containing 1 
SETD1B                0.030   SET domain containing 1B 
SFPQ                  0.029   splicing factor proline/glutamine rich (polypyrimidin...
CCNK                  0.029   cyclin K isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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