Guide to the Human Genome
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Name: AZI2 Sequence: fasta or formatted (243aa) NCBI GI: 197313705
Description:

5-azacytidine induced 2 isoform b

Referenced in:

NF-kappaB Pathway

Other entries for this name:
alt prot [392aa] 5-azacytidine induced 2 isoform a
alt prot [232aa] 5-azacytidine induced 2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         13           1
 C cysteine            2.5          6           1
 D aspartate           7.4         18           2
 E glutamate          11.5         28           3
 F phenylalanine       2.1          5           1
 G glycine             1.2          3           1
 H histidine           2.1          5           1
 I isoleucine          4.5         11           1
 K lysine              9.9         24           2
 L leucine            11.5         28           2
 M methionine          2.1          5           1
 N asparagine          4.9         12           1
 P proline             1.6          4           2
 Q glutamine           5.3         13           2
 R arginine            5.3         13           1
 S serine             10.3         25           2
 T threonine           3.3          8           1
 V valine              5.8         14           1
 W tryptophan          1.2          3           1
 Y tyrosine            2.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   5-azacytidine induced 2 isoform b 
AZI2                  0.879   5-azacytidine induced 2 isoform c 
AZI2                  0.875   5-azacytidine induced 2 isoform a 
TBKBP1                0.079   TBK1 binding protein 1 
SYCP1                 0.066   synaptonemal complex protein 1 
CCDC88A               0.064   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.064   coiled-coil domain containing 88A isoform 1 
PMFBP1                0.055   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.055   polyamine modulated factor 1 binding protein 1 isof...
CYTSA                 0.053   cytospin A 
CYTSA                 0.053   cytospin A 
KIAA1524              0.048   p90 autoantigen 
MYO5C                 0.046   myosin VC 
CLIP1                 0.044   restin isoform b 
CLIP1                 0.044   restin isoform a 
ERC1                  0.044   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.044   RAB6-interacting protein 2 isoform delta 
ATRIP                 0.042   ATR interacting protein isoform 2 
ATRIP                 0.042   ATR interacting protein isoform 1 
CNTLN                 0.042   centlein isoform 1 
CNTLN                 0.042   centlein isoform 2 
KRT9                  0.039   keratin 9 
CCDC18                0.039   sarcoma antigen NY-SAR-41 
TANK                  0.039   TRAF interacting protein TANK isoform b 
TANK                  0.039   TRAF interacting protein TANK isoform a 
RAI14                 0.039   retinoic acid induced 14 isoform d 
RAI14                 0.039   retinoic acid induced 14 isoform c 
RAI14                 0.039   retinoic acid induced 14 isoform b 
RAI14                 0.039   retinoic acid induced 14 isoform a 
RAI14                 0.039   retinoic acid induced 14 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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