Guide to the Human Genome
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Name: ARHGAP17 Sequence: fasta or formatted (803aa) NCBI GI: 54860105
Description:

nadrin isoform 2

Referenced in:

Rho and Rac
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [881aa] nadrin isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         73           3
 C cysteine            0.9          7           1
 D aspartate           4.1         33           1
 E glutamate           6.6         53           2
 F phenylalanine       2.5         20           2
 G glycine             5.5         44           2
 H histidine           3.7         30           2
 I isoleucine          2.7         22           2
 K lysine              6.1         49           2
 L leucine             9.1         73           3
 M methionine          2.4         19           1
 N asparagine          4.1         33           2
 P proline            11.7         94           4
 Q glutamine           6.2         50           1
 R arginine            4.5         36           2
 S serine              8.3         67           3
 T threonine           5.7         46           2
 V valine              4.7         38           2
 W tryptophan          0.9          7           1
 Y tyrosine            1.1          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nadrin isoform 2 
ARHGAP17              0.953   nadrin isoform 1 
RICH2                 0.382   Rho GTPase-activating protein RICH2 
SH3BP1                0.297   SH3-domain binding protein 1 
SNX26                 0.062   sorting nexin 26 
ARHGAP24              0.057   Rho GTPase activating protein 24 isoform 2 
ARHGAP24              0.057   Rho GTPase activating protein 24 isoform 3 
ARHGAP24              0.057   Rho GTPase activating protein 24 isoform 1 
ARHGAP22              0.055   Rho GTPase activating protein 2 
RICS                  0.051   Rho GTPase-activating protein isoform 1 
RICS                  0.051   Rho GTPase-activating protein isoform 2 
ARHGAP30              0.051   Rho GTPase activating protein 30 isoform 2 
ARHGAP30              0.051   Rho GTPase activating protein 30 isoform 1 
ARHGAP23              0.050   Rho GTPase activating protein 23 
OPHN1                 0.049   oligophrenin 1 
CDGAP                 0.048   Cdc42 GTPase-activating protein 
TAGAP                 0.048   T-cell activation Rho GTPase-activating protein isof...
ARHGAP5               0.047   Rho GTPase activating protein 5 isoform a 
ARHGAP5               0.047   Rho GTPase activating protein 5 isoform b 
ARHGAP21              0.047   Rho GTPase activating protein 21 
ABR                   0.046   active breakpoint cluster region-related  protein i...
GRLF1                 0.046   glucocorticoid receptor DNA binding factor 1 
HMHA1                 0.046   minor histocompatibility antigen HA-1 
ABR                   0.046   active breakpoint cluster region-related  protein is...
ABR                   0.046   active breakpoint cluster region-related  protein is...
ARHGAP25              0.046   Rho GTPase activating protein 25 isoform a 
ARHGAP25              0.046   Rho GTPase activating protein 25 isoform b 
MYO9B                 0.045   myosin IXB isoform 1 
SRGAP1                0.045   SLIT-ROBO Rho GTPase activating protein 1 
ARHGAP1               0.044   Rho GTPase activating protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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