Guide to the Human Genome
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Name: ARHGAP17 Sequence: fasta or formatted (881aa) NCBI GI: 54860079
Description:

nadrin isoform 1

Referenced in:

Rho and Rac
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [803aa] nadrin isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         78           3
 C cysteine            0.8          7           1
 D aspartate           4.1         36           1
 E glutamate           6.4         56           2
 F phenylalanine       2.6         23           2
 G glycine             6.4         56           3
 H histidine           3.6         32           2
 I isoleucine          2.7         24           2
 K lysine              5.8         51           2
 L leucine             8.7         77           3
 M methionine          2.3         20           1
 N asparagine          3.9         34           2
 P proline            12.1        107           4
 Q glutamine           6.1         54           1
 R arginine            4.5         40           2
 S serine              8.9         78           3
 T threonine           5.7         50           2
 V valine              4.8         42           2
 W tryptophan          0.8          7           1
 Y tyrosine            1.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nadrin isoform 1 
ARHGAP17              0.846   nadrin isoform 2 
RICH2                 0.379   Rho GTPase-activating protein RICH2 
SH3BP1                0.250   SH3-domain binding protein 1 
SNX26                 0.056   sorting nexin 26 
ARHGAP24              0.052   Rho GTPase activating protein 24 isoform 2 
ARHGAP24              0.052   Rho GTPase activating protein 24 isoform 3 
ARHGAP24              0.052   Rho GTPase activating protein 24 isoform 1 
ARHGAP22              0.050   Rho GTPase activating protein 2 
PRB2                  0.047   proline-rich protein BstNI subfamily 2 
RICS                  0.047   Rho GTPase-activating protein isoform 1 
RICS                  0.047   Rho GTPase-activating protein isoform 2 
ARHGAP23              0.046   Rho GTPase activating protein 23 
ARHGAP30              0.046   Rho GTPase activating protein 30 isoform 2 
ARHGAP30              0.046   Rho GTPase activating protein 30 isoform 1 
ARHGAP4               0.045   Rho GTPase activating protein 4 
SRGAP1                0.044   SLIT-ROBO Rho GTPase activating protein 1 
CDGAP                 0.043   Cdc42 GTPase-activating protein 
PRB1                  0.043   proline-rich protein BstNI subfamily 1 isoform 1 pre...
ARHGAP5               0.042   Rho GTPase activating protein 5 isoform a 
ARHGAP5               0.042   Rho GTPase activating protein 5 isoform b 
NACA                  0.042   nascent polypeptide-associated complex alpha subuni...
ARHGAP21              0.042   Rho GTPase activating protein 21 
PRB3                  0.042   proline-rich protein BstNI subfamily 3 precursor [H...
TAGAP                 0.042   T-cell activation Rho GTPase-activating protein isof...
OPHN1                 0.042   oligophrenin 1 
ABR                   0.042   active breakpoint cluster region-related  protein i...
HMHA1                 0.042   minor histocompatibility antigen HA-1 
ABR                   0.042   active breakpoint cluster region-related  protein is...
ABR                   0.042   active breakpoint cluster region-related  protein is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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