Guide to the Human Genome
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Name: AZI2 Sequence: fasta or formatted (392aa) NCBI GI: 11968003
Description:

5-azacytidine induced 2 isoform a

Referenced in:

NF-kappaB Pathway

Other entries for this name:
alt prot [243aa] 5-azacytidine induced 2 isoform b
alt prot [232aa] 5-azacytidine induced 2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         18           1
 C cysteine            2.3          9           1
 D aspartate           6.1         24           2
 E glutamate           9.4         37           3
 F phenylalanine       1.8          7           1
 G glycine             2.6         10           1
 H histidine           3.3         13           1
 I isoleucine          3.3         13           1
 K lysine              9.4         37           2
 L leucine            12.5         49           2
 M methionine          1.8          7           1
 N asparagine          5.9         23           1
 P proline             4.6         18           2
 Q glutamine           4.6         18           2
 R arginine            4.6         18           1
 S serine              9.2         36           2
 T threonine           5.6         22           2
 V valine              4.8         19           1
 W tryptophan          1.0          4           1
 Y tyrosine            2.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   5-azacytidine induced 2 isoform a 
AZI2                  0.521   5-azacytidine induced 2 isoform b 
AZI2                  0.518   5-azacytidine induced 2 isoform c 
TBKBP1                0.059   TBK1 binding protein 1 
CCDC88A               0.043   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.043   coiled-coil domain containing 88A isoform 1 
SYCP1                 0.042   synaptonemal complex protein 1 
TANK                  0.042   TRAF interacting protein TANK isoform a 
FILIP1                0.037   filamin A interacting protein 1 
CCDC18                0.033   sarcoma antigen NY-SAR-41 
ERC1                  0.030   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.030   RAB6-interacting protein 2 isoform delta 
RAI14                 0.030   retinoic acid induced 14 isoform d 
RAI14                 0.030   retinoic acid induced 14 isoform c 
RAI14                 0.030   retinoic acid induced 14 isoform b 
RAI14                 0.030   retinoic acid induced 14 isoform a 
RAI14                 0.030   retinoic acid induced 14 isoform a 
RAI14                 0.030   retinoic acid induced 14 isoform a 
GOLGA4                0.030   golgi autoantigen, golgin subfamily a, 4 
C10orf118             0.030   CTCL tumor antigen L14-2 
CGNL1                 0.029   cingulin-like 1 
CYTSA                 0.029   cytospin A 
CYTSA                 0.029   cytospin A 
PMFBP1                0.029   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.029   polyamine modulated factor 1 binding protein 1 isof...
CLIP1                 0.029   restin isoform b 
CLIP1                 0.029   restin isoform a 
CEP110                0.027   centrosomal protein 110kDa 
KIF5B                 0.027   kinesin family member 5B 
MYO5C                 0.027   myosin VC 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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