Guide to the Human Genome
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Name: MUC7 Sequence: fasta or formatted (377aa) NCBI GI: 222418649
Description:

mucin 7, secreted precursor

Referenced in:

Mucins

Other entries for this name:
alt mRNA [377aa] mucin 7, secreted precursor
alt mRNA [377aa] mucin 7, secreted precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.7         44           2
 C cysteine            1.3          5           1
 D aspartate           1.9          7           2
 E glutamate           3.4         13           1
 F phenylalanine       2.4          9           1
 G glycine             0.8          3           1
 H histidine           3.2         12           3
 I isoleucine          2.4          9           2
 K lysine              3.7         14           1
 L leucine             5.3         20           2
 M methionine          0.8          3           1
 N asparagine          3.7         14           2
 P proline            20.2         76           2
 Q glutamine           3.4         13           1
 R arginine            2.9         11           2
 S serine             12.5         47           3
 T threonine          16.4         62           4
 V valine              3.2         12           2
 W tryptophan          0.0          0           0
 Y tyrosine            0.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mucin 7, secreted precursor 
MUC7                  1.000   mucin 7, secreted precursor 
MUC7                  1.000   mucin 7, secreted precursor 
MUC2                  0.208   mucin 2 precursor 
NACA                  0.152   nascent polypeptide-associated complex alpha subuni...
LOC100294420          0.129   PREDICTED: similar to mucin 2 
PRG4                  0.123   proteoglycan 4 isoform D 
PRG4                  0.123   proteoglycan 4 isoform C 
PRG4                  0.123   proteoglycan 4 isoform B 
PRG4                  0.123   proteoglycan 4 isoform A 
FLJ22184              0.111   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.109   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.104   PREDICTED: hypothetical protein FLJ22184 
LOC100128719          0.101   PREDICTED: hypothetical protein, partial 
LOC100128719          0.101   PREDICTED: hypothetical protein, partial 
MUC5B                 0.100   mucin 5, subtype B, tracheobronchial 
LOC284297             0.099   hypothetical protein LOC284297 
MLL2                  0.099   myeloid/lymphoid or mixed-lineage leukemia 2 
MUC6                  0.096   mucin 6, gastric 
RAPH1                 0.096   Ras association and pleckstrin homology domains 1 is...
MUC5AC                0.092   mucin 5AC 
LOC100134147          0.092   PREDICTED: hypothetical protein 
KIAA0754              0.091   hypothetical protein LOC643314 
MUC17                 0.091   mucin 17 
POM121                0.091   nuclear pore membrane protein 121 
POLR2A                0.089   DNA-directed RNA polymerase II A 
BAT2D1                0.088   HBxAg transactivated protein 2 
LOC100288540          0.087   PREDICTED: hypothetical protein XP_002342775 
FAM65A                0.085   hypothetical protein LOC79567 
POM121C               0.085   POM121 membrane glycoprotein (rat)-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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