Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 74271888
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|74271888 lipin 3 [Homo sapiens]
(851 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|74271888 lipin 3 [Homo sapiens] 1734 0.0
gi|7662022 lipin 2 [Homo sapiens] 805 0.0
gi|22027648 lipin 1 [Homo sapiens] 748 0.0
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 50 1e-05
gi|50428935 BPY2 interacting protein 1 [Homo sapiens] 49 2e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 47 7e-05
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 45 3e-04
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 45 3e-04
gi|55741849 WD repeat domain 22 [Homo sapiens] 43 0.001
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 43 0.001
gi|7662146 DnaJ (Hsp40) homolog, subfamily C, member 6 [Homo sap... 42 0.002
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 42 0.003
gi|188536004 zinc finger protein 469 [Homo sapiens] 42 0.003
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 42 0.003
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 41 0.005
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 41 0.005
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 41 0.005
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 41 0.005
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 41 0.005
gi|88196790 coiled-coil domain containing 88 [Homo sapiens] 41 0.005
gi|178557736 microtubule-associated protein tau isoform 5 [Homo ... 40 0.009
gi|18643383 inositol 1,4,5-trisphosphate 3-kinase C [Homo sapiens] 40 0.012
gi|71274152 hypothetical protein LOC388939 [Homo sapiens] 40 0.012
gi|150418009 transforming, acidic coiled-coil containing protein... 39 0.016
gi|154800453 tastin isoform 1 [Homo sapiens] 39 0.020
gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens] 39 0.027
gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens] 39 0.027
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 39 0.027
gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo sapi... 39 0.027
gi|109715844 BCL2/adenovirus E1B 19kD interacting protein like i... 38 0.035
>gi|74271888 lipin 3 [Homo sapiens]
Length = 851
Score = 1734 bits (4490), Expect = 0.0
Identities = 851/851 (100%), Positives = 851/851 (100%)
Query: 1 MNYVGQLAETVFGTVKELYRGLNPATLSGGIDVLVVKQVDGSFRCSPFHVRFGKLGVLRS 60
MNYVGQLAETVFGTVKELYRGLNPATLSGGIDVLVVKQVDGSFRCSPFHVRFGKLGVLRS
Sbjct: 1 MNYVGQLAETVFGTVKELYRGLNPATLSGGIDVLVVKQVDGSFRCSPFHVRFGKLGVLRS 60
Query: 61 REKVVDIELNGEPVDLHMKLGDSGEAFFVQELESDDEHVPPGLCTSPIPWGGLSGFPSDS 120
REKVVDIELNGEPVDLHMKLGDSGEAFFVQELESDDEHVPPGLCTSPIPWGGLSGFPSDS
Sbjct: 61 REKVVDIELNGEPVDLHMKLGDSGEAFFVQELESDDEHVPPGLCTSPIPWGGLSGFPSDS 120
Query: 121 QLGTASEPEGLVMAGTASTGRRKRRRRRKPKQKEDAVATDSSPEELEAGAESELSLPEKL 180
QLGTASEPEGLVMAGTASTGRRKRRRRRKPKQKEDAVATDSSPEELEAGAESELSLPEKL
Sbjct: 121 QLGTASEPEGLVMAGTASTGRRKRRRRRKPKQKEDAVATDSSPEELEAGAESELSLPEKL 180
Query: 181 RPEPPGVQLEEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTPEPSPLRA 240
RPEPPGVQLEEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTPEPSPLRA
Sbjct: 181 RPEPPGVQLEEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTPEPSPLRA 240
Query: 241 ESHMQWAWGRLPKVARAERPESSVVLEGRAGATSPPRGGPSTPSTSVAGGVDPLGLPIQQ 300
ESHMQWAWGRLPKVARAERPESSVVLEGRAGATSPPRGGPSTPSTSVAGGVDPLGLPIQQ
Sbjct: 241 ESHMQWAWGRLPKVARAERPESSVVLEGRAGATSPPRGGPSTPSTSVAGGVDPLGLPIQQ 300
Query: 301 TEAGADLQPDTEDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWATLEVPVPTGQP 360
TEAGADLQPDTEDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWATLEVPVPTGQP
Sbjct: 301 TEAGADLQPDTEDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWATLEVPVPTGQP 360
Query: 361 ERVSRGKGSPKRSQHLGPSDIYLDDLPSLDSENAALYFPQSDSGLGARRWSEPSSQKSLR 420
ERVSRGKGSPKRSQHLGPSDIYLDDLPSLDSENAALYFPQSDSGLGARRWSEPSSQKSLR
Sbjct: 361 ERVSRGKGSPKRSQHLGPSDIYLDDLPSLDSENAALYFPQSDSGLGARRWSEPSSQKSLR 420
Query: 421 DPNPEHEPEPTLDTVDTIALSLCGGLADSRDISLEKFNQHSVSYQDLTKNPGLLDDPNLV 480
DPNPEHEPEPTLDTVDTIALSLCGGLADSRDISLEKFNQHSVSYQDLTKNPGLLDDPNLV
Sbjct: 421 DPNPEHEPEPTLDTVDTIALSLCGGLADSRDISLEKFNQHSVSYQDLTKNPGLLDDPNLV 480
Query: 481 VKINGKHYNWAVAAPMILSLQAFQKNLPKSTMDKLEREKMPRKGGRWWFSWRRRDFLAEE 540
VKINGKHYNWAVAAPMILSLQAFQKNLPKSTMDKLEREKMPRKGGRWWFSWRRRDFLAEE
Sbjct: 481 VKINGKHYNWAVAAPMILSLQAFQKNLPKSTMDKLEREKMPRKGGRWWFSWRRRDFLAEE 540
Query: 541 RSAQKEKTAAKEQQGEKTEVLSSDDDAPDSPVILEIPSLPPSTPPSTPTYKKSLRLSSDQ 600
RSAQKEKTAAKEQQGEKTEVLSSDDDAPDSPVILEIPSLPPSTPPSTPTYKKSLRLSSDQ
Sbjct: 541 RSAQKEKTAAKEQQGEKTEVLSSDDDAPDSPVILEIPSLPPSTPPSTPTYKKSLRLSSDQ 600
Query: 601 IRRLNLQEGANDVVFSVTTQYQGTCRCKATIYLWKWDDKVVISDIDGTITKSDALGHILP 660
IRRLNLQEGANDVVFSVTTQYQGTCRCKATIYLWKWDDKVVISDIDGTITKSDALGHILP
Sbjct: 601 IRRLNLQEGANDVVFSVTTQYQGTCRCKATIYLWKWDDKVVISDIDGTITKSDALGHILP 660
Query: 661 QLGKDWTHQGITSLYHKIQLNGYKFLYCSARAIGMADLTKGYLQWVSEGGCSLPKGPILL 720
QLGKDWTHQGITSLYHKIQLNGYKFLYCSARAIGMADLTKGYLQWVSEGGCSLPKGPILL
Sbjct: 661 QLGKDWTHQGITSLYHKIQLNGYKFLYCSARAIGMADLTKGYLQWVSEGGCSLPKGPILL 720
Query: 721 SPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPHGQPFYAAFGNRPNDVFAYRQVGLP 780
SPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPHGQPFYAAFGNRPNDVFAYRQVGLP
Sbjct: 721 SPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPHGQPFYAAFGNRPNDVFAYRQVGLP 780
Query: 781 ESRIFTVNPRGELIQELIKNHKSTYERLGEVVELLFPPVARGPSTDLANPEYSNFCYWRE 840
ESRIFTVNPRGELIQELIKNHKSTYERLGEVVELLFPPVARGPSTDLANPEYSNFCYWRE
Sbjct: 781 ESRIFTVNPRGELIQELIKNHKSTYERLGEVVELLFPPVARGPSTDLANPEYSNFCYWRE 840
Query: 841 PLPAVDLDTLD 851
PLPAVDLDTLD
Sbjct: 841 PLPAVDLDTLD 851
>gi|7662022 lipin 2 [Homo sapiens]
Length = 896
Score = 805 bits (2079), Expect = 0.0
Identities = 445/913 (48%), Positives = 582/913 (63%), Gaps = 81/913 (8%)
Query: 1 MNYVGQLAETVFGTVKELYRGLNPATLSGGIDVLVVKQVDGSFRCSPFHVRFGKLGVLRS 60
MNYVGQLA V TVKELY+G+N ATLSG IDV+VV+Q DGS++CSPFHVRFGKLGVLRS
Sbjct: 1 MNYVGQLAGQVIVTVKELYKGINQATLSGCIDVIVVQQQDGSYQCSPFHVRFGKLGVLRS 60
Query: 61 REKVVDIELNGEPVDLHMKLGDSGEAFFVQELESDDEHVPPGLCTSPIPW---------- 110
+EKV+DIE+NG VDLHMKLGD+GEAFFV+E E + E +P L TSPIP
Sbjct: 61 KEKVIDIEINGSAVDLHMKLGDNGEAFFVEETEEEYEKLPAYLATSPIPTEDQFFKDIDT 120
Query: 111 -----GGLSGFPSDSQLGTASEPEGLVMAGTASTGRRKRRRRRKPKQ---KEDAVATDSS 162
GG S + E E + T S+ ++K+RRR+K KQ KE+ A+ ++
Sbjct: 121 PLVKSGGDETPSQSSDISHVLETETIF---TPSSVKKKKRRRKKYKQDSKKEEQAASAAA 177
Query: 163 PEELEAGAESELSLPEKLRPEPPGVQLEEKSSLQPK-----DIYPYSDGEWPPQASLSAG 217
+ + G S+ + L+E+ +P D YP SDG+W P + +
Sbjct: 178 EDTCDVGVSSDDDKGAQAARGSSNASLKEEECKEPLLFHSGDHYPLSDGDWSPLET-TYP 236
Query: 218 ELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRLPKVARAERPESSVVLEGRAGATSPPR 277
+ PKSDSELEV+ P S LR+ESHM+W WG P+ + + E S PR
Sbjct: 237 QTACPKSDSELEVK-PAESLLRSESHMEWTWGGFPESTKVSKRERS---------DHHPR 286
Query: 278 GGPSTPSTSVAGGVDPL-GLPIQQTEAGADLQPDTEDPTLVGPPLHTPETEESKTQSSGD 336
TPS + V P I + E A ++ T+V P T+ S S +
Sbjct: 287 TATITPSENTHFRVIPSEDNLISEVEKDASMEDTV--CTIVKPKPRALGTQMSDPTSVAE 344
Query: 337 MGLPPASKSW-----------SWATLEVPV---PTGQPERVSRGKGSPKRSQHLGPSDIY 382
+ PP + + A E P P + + S+ KG KRSQH GP DIY
Sbjct: 345 LLEPPLESTQISSMLDADHLPNAALAEAPSESKPAAKVDSPSKKKGVHKRSQHQGPDDIY 404
Query: 383 LDDLPSLDSENAALYFPQSDSGLGARRWSEPSSQKSLRDPNP----------EHEPEPTL 432
LDDL L+ E AALYFP+S+S G+R+W E + + P E + +
Sbjct: 405 LDDLKGLEPEVAALYFPKSESEPGSRQWPESDTLSGSQSPQSVGSAAADSGTECLSDSAM 464
Query: 433 DTVDTIALSLCGGLADSRDISLEKFNQHSVSYQDLTKNPGLLDDPNLVVKINGKHYNWAV 492
D D + LSLCGGL+++ +IS EKF +H ++Y + +NPGL+D+PNLV++I ++YNWA+
Sbjct: 465 DLPD-VTLSLCGGLSENGEISKEKFMEHIITYHEFAENPGLIDNPNLVIRIYNRYYNWAL 523
Query: 493 AAPMILSLQAFQKNLPKSTMDKLEREKMPRKGGRWWFSWRRRDFLAEERSAQKE------ 546
AAPMILSLQ FQK+LPK+T++ ++KMP+K GRWWF WR+R+ + ++ KE
Sbjct: 524 AAPMILSLQVFQKSLPKATVESWVKDKMPKKSGRWWF-WRKRESMTKQLPESKEGKSEAP 582
Query: 547 -----KTAAKEQQGEKTEV--LSSDDDAPDSPVILEIPSLP--PSTPPSTPTYKKSLRLS 597
+++KE G + SSD+ + + + + +P P + ST +YKKSLRLS
Sbjct: 583 PASDLPSSSKEPAGARPAENDSSSDEGSQELEESITVDPIPTEPLSHGSTTSYKKSLRLS 642
Query: 598 SDQIRRLNLQEGANDVVFSVTTQYQGTCRCKATIYLWKWDDKVVISDIDGTITKSDALGH 657
SDQI +L L +G NDVVFS+TTQYQGTCRC TIYLW W+DK++ISDIDGTITKSDALG
Sbjct: 643 SDQIAKLKLHDGPNDVVFSITTQYQGTCRCAGTIYLWNWNDKIIISDIDGTITKSDALGQ 702
Query: 658 ILPQLGKDWTHQGITSLYHKIQLNGYKFLYCSARAIGMADLTKGYLQWVSEGGCSLPKGP 717
ILPQLGKDWTHQGI LYH I NGYKFLYCSARAIGMAD+T+GYL WV++ G LP+GP
Sbjct: 703 ILPQLGKDWTHQGIAKLYHSINENGYKFLYCSARAIGMADMTRGYLHWVNDKGTILPRGP 762
Query: 718 ILLSPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPHGQPFYAAFGNRPNDVFAYRQV 777
++LSPSSLFSA HREVIEKKPE FK+ CL+DI+ LF P QPFYAAFGNRPNDV+AY QV
Sbjct: 763 LMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAFGNRPNDVYAYTQV 822
Query: 778 GLPESRIFTVNPRGELIQELIKNHKSTYERLGEVVELLFPPVARGPSTDLANPEYSNFCY 837
G+P+ RIFTVNP+GELIQE K +KS+Y RL E+VE +FP +++ ++ PE+S+FCY
Sbjct: 823 GVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSAFPCPEFSSFCY 882
Query: 838 WREPLPAVDLDTL 850
WR+P+P VDLD L
Sbjct: 883 WRDPIPEVDLDDL 895
>gi|22027648 lipin 1 [Homo sapiens]
Length = 890
Score = 748 bits (1932), Expect = 0.0
Identities = 429/900 (47%), Positives = 563/900 (62%), Gaps = 79/900 (8%)
Query: 1 MNYVGQLAETVFGTVKELYRGLNPATLSGGIDVLVVKQVDGSFRCSPFHVRFGKLGVLRS 60
MNYVGQLA VF TVKELY+GLNPATLSG ID++V++Q +G+ +CSPFHVRFGK+GVLRS
Sbjct: 1 MNYVGQLAGQVFVTVKELYKGLNPATLSGCIDIIVIRQPNGNLQCSPFHVRFGKMGVLRS 60
Query: 61 REKVVDIELNGEPVDLHMKLGDSGEAFFVQELESDDEHVPPGLCTSPIPWGGLSGFPSDS 120
REKVVDIE+NGE VDLHMKLGD+GEAFFVQE ++D E +P L TSPI G S
Sbjct: 61 REKVVDIEINGESVDLHMKLGDNGEAFFVQETDNDQEVIPMHLATSPILSEGASRMECQL 120
Query: 121 QLGTASEPEGL-------VMA-----GTASTGRRKRRRRRKPK-------------QKED 155
+ G+ GL V+A ++S +++R+RRRK + + ED
Sbjct: 121 KRGSVDRMRGLDPSTPAQVIAPSETPSSSSVVKKRRKRRRKSQLDSLKRDDNMNTSEDED 180
Query: 156 AVATDSSPEELEAGAESELSLPEKLRPEPPGVQLEEKSS--LQPKDI-YPYSDGEWPPQA 212
+ S +E ES +LP + P + E S + P+ YP SD EW P
Sbjct: 181 MFPIEMSSDEAMELLESSRTLPNDIPPFQDDIPEENLSLAVIYPQSASYPNSDREWSPTP 240
Query: 213 SLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRLPKVARAERPESSVVLEGRAGA 272
S S ++PKSDSEL ++ E + + M W WG LP+ A++ P +
Sbjct: 241 SPSGSRPSTPKSDSELVSKSTERTGQK-NPEMLWLWGELPQAAKSSSPH-------KMKE 292
Query: 273 TSPPRGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQPDTEDPTLVGPPLHTPETEESKTQ 332
+SP S + + + ++ +D + PTLVG L +++ Q
Sbjct: 293 SSP------LSSRKICDKSHFQAIHSESSDTFSD-----QSPTLVGGALLDQNKPQTEMQ 341
Query: 333 SSGDMGLPPASKSWSWATL--EVPVPTGQPERVSRGKGSP-----KRSQHLGPSDIYLDD 385
+ L + + E+ P+ + + SP KRS+HLG +YLDD
Sbjct: 342 FVNEEDLETLGAAAPLLPMIEELKPPSASVVQTANKTDSPSRKRDKRSRHLGADGVYLDD 401
Query: 386 LPSLDSENAALYFPQSD--SGL-------GARRWSEPSSQKSLRDPNPEHEPEPTLD--- 433
L +D E AALYFP++ SGL GAR S S +S+ + E T D
Sbjct: 402 LTDMDPEVAALYFPKNGDPSGLAKHASDNGAR--SANQSPQSVGSSGVDSGVESTSDGLR 459
Query: 434 TVDTIALSLCGGLADSRDISLEKFNQHSVSYQDLTKNPGLLDDPNLVVKINGKHYNWAVA 493
+ +IA+SLCGGL+D R+I+ + F + +VSYQ NP ++DDPNLVVKI K+YNW A
Sbjct: 460 DLPSIAISLCGGLSDHREITKDAFLEQAVSYQQFVDNPAIIDDPNLVVKIGSKYYNWTTA 519
Query: 494 APMILSLQAFQKNLPKSTMDKLEREKMPRKGGRWWFSWRRRDFLAEERSAQKEKTAAKEQ 553
AP++L++QAFQK LPK+T++ + R+KMP+KGGRWWFSWR R+ +E S ++ A K
Sbjct: 520 APLLLAMQAFQKPLPKATVESIMRDKMPKKGGRWWFSWRGRNTTIKEESKPEQCLAGKAH 579
Query: 554 Q-GEKTEVLS------SDDDAPDSPVILEIPSLPPSTP--PSTPTYKKSLRLSSDQIRRL 604
GE+ LS + + D PS P P+ +YKK+LRL+S+Q++ L
Sbjct: 580 STGEQPPQLSLATRVKHESSSSDEERAAAKPSNAGHLPLLPNV-SYKKTLRLTSEQLKSL 638
Query: 605 NLQEGANDVVFSVTTQYQGTCRCKATIYLWKWDDKVVISDIDGTITKSDALGHILPQLGK 664
L+ G NDVVFSVTTQYQGTCRC+ TIYLW WDDKV+ISDIDGTIT+SD LGHILP LGK
Sbjct: 639 KLKNGPNDVVFSVTTQYQGTCRCEGTIYLWNWDDKVIISDIDGTITRSDTLGHILPTLGK 698
Query: 665 DWTHQGITSLYHKIQLNGYKFLYCSARAIGMADLTKGYLQWVSEGGCSLPKGPILLSPSS 724
DWTHQGI LYHK+ NGYKFLYCSARAIGMAD+T+GYL WV+E G LP+GP+LLSPSS
Sbjct: 699 DWTHQGIAKLYHKVSQNGYKFLYCSARAIGMADMTRGYLHWVNERGTVLPQGPLLLSPSS 758
Query: 725 LFSALHREVIEKKPEVFKVACLSDIQQLFLPHGQPFYAAFGNRPNDVFAYRQVGLPESRI 784
LFSALHREVIEKKPE FKV CL+DI+ LF P+ +PFYAAFGNRP DV++Y+QVG+ +RI
Sbjct: 759 LFSALHREVIEKKPEKFKVQCLTDIKNLFFPNTEPFYAAFGNRPADVYSYKQVGVSLNRI 818
Query: 785 FTVNPRGELIQELIKNHKSTYERLGEVVELLFPPVARGPSTDL-ANPEYSNFCYWREPLP 843
FTVNP+GEL+QE K + S+Y RL EVV+ +FP + R S+D + +SNF +WREPLP
Sbjct: 819 FTVNPKGELVQEHAKTNISSYVRLCEVVDHVFPLLKRSHSSDFPCSDTFSNFTFWREPLP 878
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 49.7 bits (117), Expect = 1e-05
Identities = 97/372 (26%), Positives = 121/372 (32%), Gaps = 65/372 (17%)
Query: 81 GDSGEAFFVQELESDDEHVPPGLCTSPIPWGGLSGFPSDSQLGTASEPEGLVMAGTASTG 140
G S A L S PPG C SP +G + + G + L G+ S+
Sbjct: 864 GFSAPAGLSPLLPSSSSSPPPGACGSPSAPTPSAGVAATTIAGFGHFHKAL--GGSLSSS 921
Query: 141 RRKRRRRRKPKQKEDAVATDSSPEELEAGAESELSLPEKLRPEPPGVQLEEKSSLQPKDI 200
+P + A P GA L LPE P PP + S
Sbjct: 922 DSPLLTPLQPGARSPQAA---QPSPAPPGARGGLGLPEHFLPPPPSSRSPSSS------- 971
Query: 201 YPYSDGEWPPQASLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRLPKVARAERP 260
P G+ P LS G T P S E R PEP L VA A
Sbjct: 972 -PGQLGQ--PPGELSLGLATGPLSTPETPPRQPEPPSL---------------VAGASGG 1013
Query: 261 ESSVVLEGRAG------ATSPPRGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQPDTEDP 314
S V R G + PPR PS P + +G L LP A P + P
Sbjct: 1014 ASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRA-SGSHGSLLLP------PASSPPPPQVP 1066
Query: 315 TLVGPPLHTPE--TEESKTQSSGDMGLPPASKSWSWATLEVPVPTGQPE---------RV 363
G P TP T++ K S+ LP TL P E R
Sbjct: 1067 QRRGTPPLTPGRLTQDLKLISASQPALPQDGAQ----TLRRASPHSSGESMAAFPLFPRA 1122
Query: 364 SRGKGSPKRSQHLGPSDIYLDDLP----SLDSENAALYFPQSDSGLGARRWSE---PSSQ 416
G G S LGP +P +L + ++ P S GAR S P +
Sbjct: 1123 GGGSGGSGSSGGLGPPGRPYGAIPGQHVTLPRKTSSGSLPPPLSLFGARATSSGGPPLTA 1182
Query: 417 KSLRDPNPEHEP 428
R+P EP
Sbjct: 1183 GPQREPGARPEP 1194
>gi|50428935 BPY2 interacting protein 1 [Homo sapiens]
Length = 1059
Score = 49.3 bits (116), Expect = 2e-05
Identities = 129/523 (24%), Positives = 191/523 (36%), Gaps = 115/523 (21%)
Query: 125 ASEPEGLVMAGTASTGRRKRRRRRKPKQKEDAVATDS---SPEELEAGAESELSL--PEK 179
+S+ EGL+ R R++P + E T+ +P EL+ + +S P +
Sbjct: 481 SSKREGLLATHPRPGQERPGVARKEPARAEAPRKTEKEAKTPRELKKDPKPSVSRTQPRE 540
Query: 180 LRPEPPGVQLEEKSSLQ----PKDIYPYSDGEWPPQA-------SLSAGELTSPK----S 224
+R V +K++ Q P+ S +PP A SL GE + P S
Sbjct: 541 VRRAASSVPNLKKTNAQAAPKPRKAPSTSHSGFPPVANGPRSPPSLRCGEASPPSAACGS 600
Query: 225 DSELEVRTP--EPSPLRAESHMQWAWGRLPKVARAERPESSVVLEGRAGATSPPRGGPST 282
+ V TP E P+ A LE A+S PR P T
Sbjct: 601 PASQLVATPSLELGPIPAGEEK--------------------ALELPLAASSIPR--PRT 638
Query: 283 PST----SVAGGVDPLGL-PIQQTEAGADLQPDTEDPTLVGPPL-------HTPETEESK 330
PS S A G + L L P++ EAG D P PT+ P L H+ E +ES
Sbjct: 639 PSPESHRSPAEGSERLSLSPLRGGEAGPDASPTVTTPTVTTPSLPAEVGSPHSTEVDESL 698
Query: 331 TQSSGDMGLPPASKSWSWATLEVPVP------TGQPERVSRGKGSPKRSQHLGPSDIYLD 384
+ S + LPP++ + S A L +P+ + P V SP +H +
Sbjct: 699 SVSFEQV-LPPSAPT-SEAGLSLPLRGPRARRSASPHDVDLCLVSPCEFEHRKAVPMAPA 756
Query: 385 DLPSLDSENAALYFPQSDSGLGARRWSEPSSQKSLRDPNPEHEPEPTLDTVDTIALSLCG 444
S +++ + GLGA S +SL PTL D + L+
Sbjct: 757 PASPGSSNDSSARSQERAGGLGAEETPPTSVSESL----------PTLSDSDPVPLA--P 804
Query: 445 GLADSRDISLEKFN--QHSVSYQDLTKNPGLLDDPNLVVKINGKHY-------------- 488
G ADS D E F +H D K P L DP+ + ++ +
Sbjct: 805 GAADS-DEDTEGFGVPRHD-PLPDPLKVPPPLPDPSSICMVDPEMLPPKTARQTENVSRT 862
Query: 489 -------NWAVAAPMILSLQAFQ-KNLP---KSTMDKLEREKMPRKGGRWWFSWRRRDFL 537
N AAP + A + K L +++ R + KGGR S
Sbjct: 863 RKPLARPNSRAAAPKATPVAAAKTKGLAGGDRASRPLSARSEPSEKGGRAPLS------- 915
Query: 538 AEERSAQKEKTAAKEQQGEKTEVLSSDDDAPDSPVILEIPSLP 580
R + KTA + G + P SPV L++ LP
Sbjct: 916 ---RKSSTPKTATRGPSGSASSRPGVSATPPKSPVYLDLAYLP 955
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 47.0 bits (110), Expect = 7e-05
Identities = 54/207 (26%), Positives = 72/207 (34%), Gaps = 25/207 (12%)
Query: 174 LSLPEKLRPEPPGVQL----EEKSSLQPKDIYPYS-DGEWPPQASLSAGELTSPKSDSEL 228
++LP K P P V L E ++ PK S P +A + P S S
Sbjct: 878 VTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPK 937
Query: 229 EVRTPE----PSPLRAESHMQWAWGRLPKVARAERPESSVVLEGRAGATSPPRGGPSTPS 284
TP PSP + W P A P+ GA +PP P +P
Sbjct: 938 GAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPK 997
Query: 285 TSVAGGVDPLGLPIQQTEAGADLQPDTEDPTLVGPPLHTPETEESKTQSSGDMGLPPASK 344
G P + GA P P+ G P TP + + T + PP+ K
Sbjct: 998 ----------GGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPA---ATPPSPK 1044
Query: 345 SWSWATLEVPVPTGQPERVSRGKGSPK 371
AT P+P G P + SPK
Sbjct: 1045 GSPAAT---PLPKGAPTTPAATLPSPK 1068
Score = 37.7 bits (86), Expect = 0.045
Identities = 56/242 (23%), Positives = 86/242 (35%), Gaps = 28/242 (11%)
Query: 209 PPQASLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRL--PKVARAERPESSVVL 266
PP+ + + T P L +P+ +P + G L P A ++
Sbjct: 1167 PPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1226
Query: 267 EGRAGATSP-PRGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQPDTEDPTLVG------- 318
+ G +P P+G P+TP+ A P G P GA P P+L G
Sbjct: 1227 SPKGGLATPSPKGAPTTPA---ATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPH 1283
Query: 319 -----PPLHTPETEESKTQSSGDMGLP------PASKSWSWATLEVPVPTGQPERVSRGK 367
P + TP + + +S G P P S S T P P G P +
Sbjct: 1284 KGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGT---PPPKGAPTPPAVTP 1340
Query: 368 GSPKRSQHLGPSDIYLDDLPSLDSENAALYFP-QSDSGLGARRWSEPSSQKSLRDPNPEH 426
SPK + L + P+ S P + S G + PS ++ P+P+
Sbjct: 1341 PSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKG 1400
Query: 427 EP 428
+P
Sbjct: 1401 DP 1402
Score = 36.2 bits (82), Expect = 0.13
Identities = 79/355 (22%), Positives = 112/355 (31%), Gaps = 37/355 (10%)
Query: 100 PPGLCTSP--IPWGGLSGFPSDSQLGTASEPEGLVMAGTASTGRRKRRRRRKPKQKEDAV 157
P G+ P P + P + P+ S+ +K R PK +
Sbjct: 875 PKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASP 934
Query: 158 ATDSSPEELEAGAESELSLPE----KLRPEPPGVQLEEKSSLQPKDIYPYSDGEWPPQAS 213
+ +P A S P K P PP S + P G P A+
Sbjct: 935 SPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAAT---PPSPKGGPATPSPKGAPTPPAA 991
Query: 214 LSAGELTSPKSDSELEVRTPE----PSPLRAESHMQWAWGR-LPKVARAERPESSVVLEG 268
P + S TP PSP + + + G P A P+ S
Sbjct: 992 TPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATP 1051
Query: 269 --RAGATSP------PRGGPSTPSTS------VAGGVDPLGLPIQQTEAGADLQPDTEDP 314
+ T+P P+GGP+TPS A P G P + GA + P P
Sbjct: 1052 LPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPP 1111
Query: 315 TLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWATLEVPVPTGQPERVSRGKGSPKRSQ 374
+ G L TP + + T + PP+ K L P P G P + SPK
Sbjct: 1112 SPKG-GLATPPHKGAPTTPA---ATPPSPK----GGLATPPPKGAPTTPAATPPSPKGGL 1163
Query: 375 HL-GPSDIYLDDLPSLDSENAALYFPQSDSGLGARRWSEPSSQKSLRDPNPEHEP 428
P + S L P + PS + L P+P+ P
Sbjct: 1164 ATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP 1218
Score = 33.9 bits (76), Expect = 0.66
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 11/100 (11%)
Query: 272 ATSPPRGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQPDTEDPTLVGPPLHTPETEESKT 331
AT PP+G P+TP+ + L P GA P P+ G L TP + + T
Sbjct: 1141 ATPPPKGAPTTPAATPPSPKGGLATP---PPKGAPTTPAATPPSPKG-GLATPSPKGAPT 1196
Query: 332 QSSGDMGLPPASKSWSWATLEVPVPTGQPERVSRGKGSPK 371
+ PP+ K L P P G P + SPK
Sbjct: 1197 TPA---ATPPSPK----GGLATPSPKGAPTTPAATPPSPK 1229
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 45.1 bits (105), Expect = 3e-04
Identities = 50/189 (26%), Positives = 73/189 (38%), Gaps = 19/189 (10%)
Query: 91 ELESDDEHVPPGLCTSPIPWGGLSGFPSDSQLGTASEPEGLVMAGTASTGRRKRRRRRKP 150
+ + DDE T+ SDS +S+ GL A +R R+
Sbjct: 115 DADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKAS 174
Query: 151 KQKEDAVATDSSPEELEAGAESELSLPEKLRPE-----------PPGVQLEEKS-SLQPK 198
+ A + S E E+ +ESE + + PE P G + ++K+ S
Sbjct: 175 SDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDS 234
Query: 199 DIYPYSDGEWPPQA----SLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRLPKV 254
D SDG P S S+ +S SDS++ V+ P AE + GR PK
Sbjct: 235 DSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPK- 293
Query: 255 ARAERPESS 263
ERP SS
Sbjct: 294 --PERPPSS 300
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 45.1 bits (105), Expect = 3e-04
Identities = 50/189 (26%), Positives = 73/189 (38%), Gaps = 19/189 (10%)
Query: 91 ELESDDEHVPPGLCTSPIPWGGLSGFPSDSQLGTASEPEGLVMAGTASTGRRKRRRRRKP 150
+ + DDE T+ SDS +S+ GL A +R R+
Sbjct: 115 DADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKAS 174
Query: 151 KQKEDAVATDSSPEELEAGAESELSLPEKLRPE-----------PPGVQLEEKS-SLQPK 198
+ A + S E E+ +ESE + + PE P G + ++K+ S
Sbjct: 175 SDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDS 234
Query: 199 DIYPYSDGEWPPQA----SLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRLPKV 254
D SDG P S S+ +S SDS++ V+ P AE + GR PK
Sbjct: 235 DSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPK- 293
Query: 255 ARAERPESS 263
ERP SS
Sbjct: 294 --PERPPSS 300
>gi|55741849 WD repeat domain 22 [Homo sapiens]
Length = 942
Score = 43.1 bits (100), Expect = 0.001
Identities = 86/387 (22%), Positives = 138/387 (35%), Gaps = 73/387 (18%)
Query: 89 VQELESDDEHVPPGLCTSPIPWGGLSGFPSDSQLGTASEPEGLVMAGTASTGRRKRRRRR 148
V E+E D + P SP S S ++SE E + AST +R RRR
Sbjct: 537 VCEVELDTDLFPRPRSPSP------EDESSSSSSSSSSEDEEELNERRASTWQRNAMRRR 590
Query: 149 KPKQKEDAVATDSSPEELEAGAESELSLPEKLRPEPPGVQLEEKSSLQPKDIYPYSDGEW 208
+ +ED + P G ++ + P +++++ SS
Sbjct: 591 QKTTREDKPSAPIKPTNTYIGEDNY---------DYPQIKVDDLSSSPTSS--------- 632
Query: 209 PPQASLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRLPKVARAERPESSVVL-- 266
P+ S S E+ ++ ++ + E +A + W R ++ + + L
Sbjct: 633 -PERSTSTLEIQPSRASPTSDIESVERKIYKA-----YKWLRYSYISYSNNKDGETSLVT 686
Query: 267 ----EGRAGATSPPRGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQPDTEDPTLVGPPLH 322
EGRAG + PS+ + L I + DL P+ G
Sbjct: 687 GEADEGRAGTSHKDNPAPSSSKEAC--------LNIAMAQRNQDLPPE-------GCSKD 731
Query: 323 TPETEESKTQSSGDMGLPPASKSWSWATLEVPVPTGQPERVSRGKGSPKRSQHLGPSDI- 381
T + E +T S+G P + S A EVP T Q S P ++ L +
Sbjct: 732 TFKEETPRTPSNG-----PGHEHSSHAWAEVPEGTSQDTGNSGSVEHPFETKKLNGKALS 786
Query: 382 -YLDDLPSLDSENAALYFPQSDSGLGARRWSEPSSQKSL--------------RDPNPEH 426
++ PS A+ S SG R S+ S ++SL R P+P H
Sbjct: 787 SRAEEPPSPPVPKASGSTLNSGSGNCPRTQSDDSEERSLETICANHNNGRLHPRPPHP-H 845
Query: 427 EPEPTLDTVDTIALSLCGGLADSRDIS 453
L ++ +A S G RD S
Sbjct: 846 NNGQNLGELEVVAYSSPGHSDTDRDNS 872
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 43.1 bits (100), Expect = 0.001
Identities = 60/210 (28%), Positives = 81/210 (38%), Gaps = 24/210 (11%)
Query: 209 PPQASLS-----AGELTSPK-------SDSELEVRTPEPSPLRAESHMQWAWGRLPKVAR 256
PP+ASL A + SP S L RTP + L+ LP+ +
Sbjct: 53 PPRASLKGTTSMASLMVSPSRASLTRMQSSSLLTRTPSMASLKRMPPRASRTRTLPRASL 112
Query: 257 AERPESSVVLEGRAGA---TSPPRGGPS-TPSTSVAGGVDPLGLPIQQTEAGADLQ--PD 310
RP ++ + + A T+P R S TPST+ A + P + +T A L P
Sbjct: 113 MRRPSTASLTRSPSRASLTTTPSRASLSMTPSTAAALTM-PSRASLTRTPPRASLTMTPS 171
Query: 311 TEDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWA----TLEVPVPTGQPERVSRG 366
T T PP +P S+T +G +K S A TL PTG P R S
Sbjct: 172 TASLTRT-PPRASPTGMPSRTSPTGMPSTASLTKMDSTASITRTLSRASPTGTPPRASPT 230
Query: 367 KGSPKRSQHLGPSDIYLDDLPSLDSENAAL 396
P+ S + PS L P S L
Sbjct: 231 GSPPRASLSMMPSTALLIRTPPRASPTGML 260
Score = 30.8 bits (68), Expect = 5.6
Identities = 44/183 (24%), Positives = 57/183 (31%), Gaps = 23/183 (12%)
Query: 210 PQASLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRLPKVARAERPESSVVLEGR 269
P S S LT S + P SP S R P A S +
Sbjct: 367 PTGSPSTASLTGLSSTASPTGTPPRASPTGTPSTASLT--RKPPRASPTGMLSRTSITKM 424
Query: 270 AGATSPPRGGPSTPSTSVAGGVDPLGLPIQ------QTEAGADLQPDTEDPT---LVGPP 320
SP R P T P G P + Q+ A P T PT P
Sbjct: 425 DSTASPTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASP 484
Query: 321 LHTPETEE----------SKTQSSGDMGLPPASKSWSWATLEVPVPTGQPERVSRGKGSP 370
+P +K +S+ + P+ S +W T PTG P + GSP
Sbjct: 485 TGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTW-TPSTASPTGSPS-TALAMGSP 542
Query: 371 KRS 373
R+
Sbjct: 543 SRA 545
>gi|7662146 DnaJ (Hsp40) homolog, subfamily C, member 6 [Homo
sapiens]
Length = 913
Score = 42.0 bits (97), Expect = 0.002
Identities = 83/339 (24%), Positives = 111/339 (32%), Gaps = 77/339 (22%)
Query: 118 SDSQLGTASEPEGLVMAGTASTGRRKRRRRRKPKQKEDAVATDSSPEELEA-GAESELSL 176
SD +L T S P G + K +KP +K+ A PE+++ G E
Sbjct: 456 SDDELLTLSSPHG-------NANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEGSAMS 508
Query: 177 PEKLRPEPPGVQLEEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTPEPS 236
P P E S D++ P QA S E S TP S
Sbjct: 509 NSFSPPAAPPTNSELLS-----DLFGGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRS 563
Query: 237 PLRAESHMQWAWGRLPKVARAERPESSVVLEGRAGATSPPRGGPSTPSTSVAGGVDPLGL 296
A +S L GAT P G PS PS G D LG
Sbjct: 564 --------------------ATSTSASPTLRVGEGATFDPFGAPSKPS-----GQDLLGS 598
Query: 297 PIQQTEAGAD--LQPDTEDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWATLEVP 354
+ + A +D LQP T P+ P +H T Q P S W W
Sbjct: 599 FLNTSSASSDPFLQP-TRSPS---PTVHASSTPAVNIQ-------PDVSGGWDWHAKPGG 647
Query: 355 VPTGQPERVSRGKGS-------PKRSQHLGPSDIYLDDLPSLDSENAALYFPQSDSGLGA 407
G + GS + Q L P DL +L S + A P + +GLG
Sbjct: 648 FGMGSKSAATSPTGSSHGTPTHQSKPQTLDP----FADLGTLGSSSFASK-PTTPTGLGG 702
Query: 408 RRWSEPSSQKSLRDP--------------NPEHEPEPTL 432
S QK+ P P+ +P+P++
Sbjct: 703 GFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKPQPSM 741
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 41.6 bits (96), Expect = 0.003
Identities = 59/231 (25%), Positives = 84/231 (36%), Gaps = 29/231 (12%)
Query: 213 SLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRLPKVARAERPESSVVLEGRAGA 272
+L AG SP S L V SP + W R P+ A A R G + +
Sbjct: 961 TLGAGTTRSPGSPPTLRVHGDTGSPRKP-----WPERRPPRPA-ATRTAPPTPSPGPSAS 1014
Query: 273 TSPPRGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQPDTEDPTLVGPP---LHTPETEES 329
PP GP+ S S L + T D P T DP P L +P+ S
Sbjct: 1015 PGPP--GPALTSDSSRELTPHSALTSEATSDAPDTSPPTPDPASRTNPDLILTSPDFALS 1072
Query: 330 KTQSSGDMGLPPASKSWSWATLEVPVPTGQPERVSRGKGSPKRSQHLGPSDIYLDDLPSL 389
SS L P P+PT P+ ++ +P L P+ + +P
Sbjct: 1073 TPDSSVVPALTPEPS-------PTPLPT-LPKELTSDPSTPSEVTSLSPTS---EQVPES 1121
Query: 390 DSENAALYFPQSDSGLGARRWSEPSSQKSLRDPNPEHEPEPTL--DTVDTI 438
D+ P S + R +PS P+P P+PT+ D + T+
Sbjct: 1122 DTTPDLDTTPYSSTVSEYSRSPDPSP-----SPHPTTTPDPTMAPDPITTL 1167
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 41.6 bits (96), Expect = 0.003
Identities = 72/307 (23%), Positives = 104/307 (33%), Gaps = 50/307 (16%)
Query: 116 FPSDSQLGTASEPEGLVMAGTASTGRRKRR----------RRRKPKQKEDAVATDSSPEE 165
F D G A+E G G AS G R RR R R+P+ + D +P
Sbjct: 954 FRKDLDSGGAAEGSGSGGGGRAS-GLRPRRNDGLGERPPPRPRRPRTQAPGSRADPAPRV 1012
Query: 166 LEAGAESELSLPEKLRPEPP--------------GVQL-----EEKSSLQPKDIYPYS-- 204
A A E + + R PP G +L ++K+ L+ D S
Sbjct: 1013 PRAAALPEETRSSRRRRLPPRKDPRKRKARGGAWGKELILKIVQQKNRLREYDFASESEE 1072
Query: 205 DGEWPPQASLSAGELTSPKSDSELEV----RTPEPSPLRAESHMQWAWGRLPKVARAERP 260
D + PP+ G + E+E+ R EP R + + P A E P
Sbjct: 1073 DEQPPPRGPGFRGRRGRGEKRKEVELTQGPREDEPQKPRKAARQEAGGDGAP--ANPEEP 1130
Query: 261 ESSVVLEGRAGATSPP-----------RGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQP 309
S GR+ P GGP DPL +P TE + +P
Sbjct: 1131 GGSRPGPGRSPQARGPSRSLETGAAAREGGPKCADRPSVAPKDPLQVP-TNTETSEETRP 1189
Query: 310 DTEDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWATLEVPVPTGQPERVSRGKGS 369
+ P P E+ T+ + + PPA+ + + QP G+
Sbjct: 1190 SLDFPQEAKEPETAEESAPDSTEFTEALRSPPAACAGEMGASPGLLIPEQPPPSRHDTGT 1249
Query: 370 PKRSQHL 376
PK S L
Sbjct: 1250 PKPSGSL 1256
Score = 30.0 bits (66), Expect = 9.5
Identities = 68/287 (23%), Positives = 98/287 (34%), Gaps = 47/287 (16%)
Query: 95 DDEHVPPGLCTSPI-PWGGLSGFPSDSQLGTASEPE----GLVMAGTAS----TGRRKRR 145
D PP L TSP P L+G + +P G V A T + T +
Sbjct: 2163 DSPVAPPSLTTSPCDPKEALAGCLLQGEGSPLEDPSSWPPGSVSAVTCTHSGDTPKDSTL 2222
Query: 146 RRRKPKQKE---DAVATDSSPEELEAGAESELSLPEKLRPEPPGVQLEEKSSLQPKDIYP 202
R + +KE ++ +SP A + S L P G + + L D P
Sbjct: 2223 RIPEDSRKEKLWESPGRATSPPLAGAVSPSVAVRATGLSSTPTGDEAQAGRGLPGPD--P 2280
Query: 203 YSDGEWP---PQASLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRLPKVARAER 259
S G P P SP + + L R E A P +
Sbjct: 2281 QSRGAPPHTNPDRMPRGHSSYSPSNTARLGHR---------EGQAVTAVPTEPPTLQGAG 2331
Query: 260 PESSVVLEGRAGATSPPRGGPSTPSTSVAGGV-------DPLGLPIQQTEA----GADLQ 308
P+S LEG G +S P TP T +G GL + +T A +D Q
Sbjct: 2332 PDSPACLEGEMGTSSKEPEDPGTPETGRSGATKMPRVTCPSTGLGLGRTTAPSSTASDFQ 2391
Query: 309 PDT-------EDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSW 348
D+ T G PL ++ K +S G P ++++ W
Sbjct: 2392 SDSPQSHRNASHQTPQGDPL---GPQDLKQRSRGYKKKPASTENGQW 2435
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 41.6 bits (96), Expect = 0.003
Identities = 71/316 (22%), Positives = 117/316 (37%), Gaps = 69/316 (21%)
Query: 152 QKEDAVATDSSPEELEAGAESELSLPE----KLRPEPPGVQLEEKSSLQPK---DIYPYS 204
+ ED A ++ E EA E++ PE + +P+ G + +E K D P S
Sbjct: 1996 ESEDVEAPEAEGEMQEAEEEAQ---PESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPES 2052
Query: 205 DGEWPPQASLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRL-PKVARAERPESS 263
DG P+A A E ++ E++ E P + Q A G P+ E PE+
Sbjct: 2053 DGVEAPEAEEEAQE-----AEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAE 2107
Query: 264 VVLEGRAGATSPPRGGPSTPST------SVAGGVDPLGLPIQQTEAGADLQPDTE----- 312
+ G +P G + P + G P ++ +A + QP++E
Sbjct: 2108 GEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQ 2167
Query: 313 ------DPTLVGPPLHTPETE-ESKTQSSGDMGLPPASKSWSWATLEVPVPTGQPERVSR 365
P L G + PE E E++ +S G +E P G+ +
Sbjct: 2168 EAEEEAQPELEG--VEAPEAEGEAQPESEG---------------IEAPEAEGEAQPELE 2210
Query: 366 GKGSPKRSQHLGPSDIYLDDLPSLDSENAALYFPQSDSGLGARRWSEPSSQKSLRD---- 421
G +P+ + P + + + ++E A P+S+ + P Q SL D
Sbjct: 2211 GVEAPEAEEEAQPEP---EGVETPEAEGEAQ--PESEGETQGEKKGSP--QVSLGDGQSE 2263
Query: 422 -------PNPEHEPEP 430
P PE P P
Sbjct: 2264 EASESSSPVPEDRPTP 2279
Score = 40.8 bits (94), Expect = 0.005
Identities = 61/260 (23%), Positives = 100/260 (38%), Gaps = 24/260 (9%)
Query: 120 SQLGTASEPEGLVMAGTASTGRRKRRRRRKPKQKEDAVATDSSPEELEAGAESELSLPE- 178
S+LG A E EG ++ TG + Q E A D P + + GAE + PE
Sbjct: 1785 SELGEA-EQEGEGISERGETGGQGSGHEDN-LQGEAAAGGDQDPGQSD-GAEG-IEAPEA 1840
Query: 179 --KLRPEPPGVQLEEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTPEPS 236
+ +PE GV+ E + ++GE P++ ++ +P+++ E + + +
Sbjct: 1841 EGEAQPESEGVEAPEAEGDAQE-----AEGEAQPESE----DVEAPEAEGEAQPESEDVE 1891
Query: 237 PLRAESHMQ--WAWGRLPKVARAERPES-SVVLEGRAGATSPPRGGPSTPSTSVA----- 288
AE +Q P+ + +PE+ SV G P G A
Sbjct: 1892 TPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAE 1951
Query: 289 GGVDPLGLPIQQTEAGADLQPDTEDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSW 348
G P I+ EA + QP++ED + + T E E S D+ P A
Sbjct: 1952 GQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQE 2011
Query: 349 ATLEVPVPTGQPERVSRGKG 368
A E + E + +G
Sbjct: 2012 AEEEAQPESDGVEAQPKSEG 2031
Score = 31.6 bits (70), Expect = 3.3
Identities = 55/222 (24%), Positives = 77/222 (34%), Gaps = 54/222 (24%)
Query: 154 EDAVATDSSPEELEAGAESELSLPEKLRPEPP---------GVQLEEKSSLQPKDIYPYS 204
E+ V + EE + G E E E ++ E GVQLEE +
Sbjct: 1294 ENTVQEEVQLEETKEGTEGEGLQEEAVQLEETKTEEGLQEEGVQLEETKETE-------G 1346
Query: 205 DGEWPPQASLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRLPKVARAERPESSV 264
+G+ +A L E T + E V+ E E PE +
Sbjct: 1347 EGQQEEEAQLEEIEETGGEGLQEEGVQLEEVK---------------------EGPEGGL 1385
Query: 265 ----VLEGRAGATSPPRGGPSTPSTSVAGGVDPLGL----PIQQTEAG---ADLQP---- 309
+ EG P G S A D G P+Q+ EAG A +P
Sbjct: 1386 QGEALEEGLKEEGLPEEGSVHGQELSEASSPDGKGSQEDDPVQEEEAGRASASAEPCPAE 1445
Query: 310 DTEDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWATL 351
TE+PT PP H ET+ S ++ L P + AT+
Sbjct: 1446 GTEEPT--EPPSHLSETDPSASERQSGSQLEPGLEKPPGATM 1485
Score = 31.2 bits (69), Expect = 4.3
Identities = 58/228 (25%), Positives = 81/228 (35%), Gaps = 40/228 (17%)
Query: 119 DSQLGTASEPEGLVMAGTASTGRRKRRRRRKPKQKEDAVATDSSPEELEAGAESELSLP- 177
D++ E EG+ + + P+ + +A E EA E++ L
Sbjct: 2152 DAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPESEGIEAPEAEGEAQPELEG 2211
Query: 178 -------EKLRPEPPGVQLEEKSSLQPKDIYPYSDGE------WPPQASLSAG--ELTSP 222
E+ +PEP GV+ E + P S+GE PQ SL G E S
Sbjct: 2212 VEAPEAEEEAQPEPEGVETPEAEG----EAQPESEGETQGEKKGSPQVSLGDGQSEEASE 2267
Query: 223 KSDSELEVR-TPEPSPLRAESHMQWAWGRLPKVARA--------ERPESSVVLEGRAGAT 273
S E R TP PSP H + P +RA + E+ VL
Sbjct: 2268 SSSPVPEDRPTPPPSPGGDTPHQRPGSQTGPSSSRASSWGNCWQKDSENDHVLGDTRSPD 2327
Query: 274 SPPRGGPST--------PSTSVAGGVD-PLG--LPIQQTEAGADLQPD 310
+ G P P +S + + PLG P Q G DLQ D
Sbjct: 2328 AKSTGTPHAERKATRMYPESSTSEQEEAPLGSRTPEQGASEGYDLQED 2375
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 40.8 bits (94), Expect = 0.005
Identities = 50/215 (23%), Positives = 76/215 (35%), Gaps = 18/215 (8%)
Query: 150 PKQKEDAVATDSSPEELEAGAESELSLPEKLRP-EPPGVQLEEKSSLQPKDIYPYSDGEW 208
PK+ + +P + A + P P EP +E + PK + P +
Sbjct: 439 PKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT---- 494
Query: 209 PPQASLSAGELTSPKSDSELEVRTPE-PSPLRAESHMQWAWGRLPKVARAERPESSVVLE 267
P + + + E +P + EL TPE P+P E PK A P+
Sbjct: 495 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTT----PKAAAPNTPKEPAPTT 550
Query: 268 GRAGA-TSPPRGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQPDTEDPTLVGPPLHTPET 326
+ A T+P P+TP + P G T +P P P P T
Sbjct: 551 PKEPAPTTPKEPAPTTPKETAP--TTPKG-----TAPTTLKEPAPTTPKKPAPKELAPTT 603
Query: 327 EESKTQSSGDMGLPPASKSWSWATLEVPVPTGQPE 361
+ T ++ D P K + T + P PT E
Sbjct: 604 TKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKE 638
Score = 35.0 bits (79), Expect = 0.29
Identities = 55/246 (22%), Positives = 87/246 (35%), Gaps = 24/246 (9%)
Query: 124 TASEPEGLVMAGTASTGRRKRR----RRRKPKQKEDAVATDSSPEELEAGAESELS--LP 177
T EP TA T +K + P E T +PEEL E + P
Sbjct: 470 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT--TPEELAPTTPEEPTPTTP 527
Query: 178 EKLRPEPPGVQL----EEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTP 233
E+ P P +E + PK+ P + E P T+PK + ++ P
Sbjct: 528 EEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAP-TTPKGTAPTTLKEP 586
Query: 234 EPSPLRAESHMQWA--WGRLPKVARAERPESSVVLEGRAGATSPPRGGPSTPSTSVAGGV 291
P+ + + + A + P ++P + +G A T+P P+TP
Sbjct: 587 APTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP-KGTA-PTTPKEPAPTTPK------- 637
Query: 292 DPLGLPIQQTEAGADLQPDTEDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWATL 351
+P + T +P P P P T + T ++ D P K + T
Sbjct: 638 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 697
Query: 352 EVPVPT 357
+ P PT
Sbjct: 698 KEPAPT 703
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 40.8 bits (94), Expect = 0.005
Identities = 50/215 (23%), Positives = 76/215 (35%), Gaps = 18/215 (8%)
Query: 150 PKQKEDAVATDSSPEELEAGAESELSLPEKLRP-EPPGVQLEEKSSLQPKDIYPYSDGEW 208
PK+ + +P + A + P P EP +E + PK + P +
Sbjct: 480 PKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT---- 535
Query: 209 PPQASLSAGELTSPKSDSELEVRTPE-PSPLRAESHMQWAWGRLPKVARAERPESSVVLE 267
P + + + E +P + EL TPE P+P E PK A P+
Sbjct: 536 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTT----PKAAAPNTPKEPAPTT 591
Query: 268 GRAGA-TSPPRGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQPDTEDPTLVGPPLHTPET 326
+ A T+P P+TP + P G T +P P P P T
Sbjct: 592 PKEPAPTTPKEPAPTTPKETAP--TTPKG-----TAPTTLKEPAPTTPKKPAPKELAPTT 644
Query: 327 EESKTQSSGDMGLPPASKSWSWATLEVPVPTGQPE 361
+ T ++ D P K + T + P PT E
Sbjct: 645 TKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKE 679
Score = 35.0 bits (79), Expect = 0.29
Identities = 55/246 (22%), Positives = 87/246 (35%), Gaps = 24/246 (9%)
Query: 124 TASEPEGLVMAGTASTGRRKRR----RRRKPKQKEDAVATDSSPEELEAGAESELS--LP 177
T EP TA T +K + P E T +PEEL E + P
Sbjct: 511 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT--TPEELAPTTPEEPTPTTP 568
Query: 178 EKLRPEPPGVQL----EEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTP 233
E+ P P +E + PK+ P + E P T+PK + ++ P
Sbjct: 569 EEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAP-TTPKGTAPTTLKEP 627
Query: 234 EPSPLRAESHMQWA--WGRLPKVARAERPESSVVLEGRAGATSPPRGGPSTPSTSVAGGV 291
P+ + + + A + P ++P + +G A T+P P+TP
Sbjct: 628 APTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP-KGTA-PTTPKEPAPTTPK------- 678
Query: 292 DPLGLPIQQTEAGADLQPDTEDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWATL 351
+P + T +P P P P T + T ++ D P K + T
Sbjct: 679 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 738
Query: 352 EVPVPT 357
+ P PT
Sbjct: 739 KEPAPT 744
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 40.8 bits (94), Expect = 0.005
Identities = 50/215 (23%), Positives = 76/215 (35%), Gaps = 18/215 (8%)
Query: 150 PKQKEDAVATDSSPEELEAGAESELSLPEKLRP-EPPGVQLEEKSSLQPKDIYPYSDGEW 208
PK+ + +P + A + P P EP +E + PK + P +
Sbjct: 532 PKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT---- 587
Query: 209 PPQASLSAGELTSPKSDSELEVRTPE-PSPLRAESHMQWAWGRLPKVARAERPESSVVLE 267
P + + + E +P + EL TPE P+P E PK A P+
Sbjct: 588 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTT----PKAAAPNTPKEPAPTT 643
Query: 268 GRAGA-TSPPRGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQPDTEDPTLVGPPLHTPET 326
+ A T+P P+TP + P G T +P P P P T
Sbjct: 644 PKEPAPTTPKEPAPTTPKETAP--TTPKG-----TAPTTLKEPAPTTPKKPAPKELAPTT 696
Query: 327 EESKTQSSGDMGLPPASKSWSWATLEVPVPTGQPE 361
+ T ++ D P K + T + P PT E
Sbjct: 697 TKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKE 731
Score = 35.0 bits (79), Expect = 0.29
Identities = 55/246 (22%), Positives = 87/246 (35%), Gaps = 24/246 (9%)
Query: 124 TASEPEGLVMAGTASTGRRKRR----RRRKPKQKEDAVATDSSPEELEAGAESELS--LP 177
T EP TA T +K + P E T +PEEL E + P
Sbjct: 563 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT--TPEELAPTTPEEPTPTTP 620
Query: 178 EKLRPEPPGVQL----EEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTP 233
E+ P P +E + PK+ P + E P T+PK + ++ P
Sbjct: 621 EEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAP-TTPKGTAPTTLKEP 679
Query: 234 EPSPLRAESHMQWA--WGRLPKVARAERPESSVVLEGRAGATSPPRGGPSTPSTSVAGGV 291
P+ + + + A + P ++P + +G A T+P P+TP
Sbjct: 680 APTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP-KGTA-PTTPKEPAPTTPK------- 730
Query: 292 DPLGLPIQQTEAGADLQPDTEDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWATL 351
+P + T +P P P P T + T ++ D P K + T
Sbjct: 731 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 790
Query: 352 EVPVPT 357
+ P PT
Sbjct: 791 KEPAPT 796
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 40.8 bits (94), Expect = 0.005
Identities = 50/215 (23%), Positives = 76/215 (35%), Gaps = 18/215 (8%)
Query: 150 PKQKEDAVATDSSPEELEAGAESELSLPEKLRP-EPPGVQLEEKSSLQPKDIYPYSDGEW 208
PK+ + +P + A + P P EP +E + PK + P +
Sbjct: 573 PKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT---- 628
Query: 209 PPQASLSAGELTSPKSDSELEVRTPE-PSPLRAESHMQWAWGRLPKVARAERPESSVVLE 267
P + + + E +P + EL TPE P+P E PK A P+
Sbjct: 629 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTT----PKAAAPNTPKEPAPTT 684
Query: 268 GRAGA-TSPPRGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQPDTEDPTLVGPPLHTPET 326
+ A T+P P+TP + P G T +P P P P T
Sbjct: 685 PKEPAPTTPKEPAPTTPKETAP--TTPKG-----TAPTTLKEPAPTTPKKPAPKELAPTT 737
Query: 327 EESKTQSSGDMGLPPASKSWSWATLEVPVPTGQPE 361
+ T ++ D P K + T + P PT E
Sbjct: 738 TKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKE 772
Score = 35.0 bits (79), Expect = 0.29
Identities = 55/246 (22%), Positives = 87/246 (35%), Gaps = 24/246 (9%)
Query: 124 TASEPEGLVMAGTASTGRRKRR----RRRKPKQKEDAVATDSSPEELEAGAESELS--LP 177
T EP TA T +K + P E T +PEEL E + P
Sbjct: 604 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT--TPEELAPTTPEEPTPTTP 661
Query: 178 EKLRPEPPGVQL----EEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTP 233
E+ P P +E + PK+ P + E P T+PK + ++ P
Sbjct: 662 EEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAP-TTPKGTAPTTLKEP 720
Query: 234 EPSPLRAESHMQWA--WGRLPKVARAERPESSVVLEGRAGATSPPRGGPSTPSTSVAGGV 291
P+ + + + A + P ++P + +G A T+P P+TP
Sbjct: 721 APTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP-KGTA-PTTPKEPAPTTPK------- 771
Query: 292 DPLGLPIQQTEAGADLQPDTEDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWATL 351
+P + T +P P P P T + T ++ D P K + T
Sbjct: 772 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 831
Query: 352 EVPVPT 357
+ P PT
Sbjct: 832 KEPAPT 837
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 40.8 bits (94), Expect = 0.005
Identities = 67/292 (22%), Positives = 108/292 (36%), Gaps = 63/292 (21%)
Query: 107 PIPWGGLSGFPSDS-QLGTASEPEGLVMAGTASTGRRKRRRRRKPKQKEDAVATDSSPEE 165
P+PW P D LG S PE + A+ G + E + + PEE
Sbjct: 2117 PVPWADAFAGPEDDLDLGPFSLPELPLQTKDAADG-----------EAEPVEESLAPPEE 2165
Query: 166 LEAGAESELS---LPEKLRPEPPGVQLEEKSSLQPKDIYPYSDGEWPPQASLSAGELTSP 222
+ GA ++ + + EPP + ++ S+ P ++ P GE P+ ++
Sbjct: 2166 MPPGAPGVINGGDVSTVVAEEPPALPPDQASTRLPAELEPEPSGE--PKLDVALEAAVEA 2223
Query: 223 KSDSELEVR-----TPEPSPLRAESHMQWAWGRLPKVARAERPESSVVLEGRAGATSPPR 277
++ E R + EP+P+ E Q G + A AE P + A +P
Sbjct: 2224 ETVPEERARGDPDSSVEPAPVPPE---QRPLGSGDQGAEAEGPPA-------ASLCAP-- 2271
Query: 278 GGPSTPSTSVAGGVDPLGLPIQQTEAG----------ADLQPDTEDPTLVGPPLHTPETE 327
GP+ + + A D G P TEA +QP+ +P P E
Sbjct: 2272 DGPAPNTVAQAQAADGAG-PEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRVE 2330
Query: 328 E---SKTQSSGDM-------GLPPASKSWSWATLEVPVPTGQPERVSRGKGS 369
E T++ M G PP+ K + PT P ++ +GS
Sbjct: 2331 EIPQRMTRNRAQMLANQSKQGPPPSEKECA--------PTPAPVTRAKARGS 2374
>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
Length = 1476
Score = 40.8 bits (94), Expect = 0.005
Identities = 79/312 (25%), Positives = 114/312 (36%), Gaps = 58/312 (18%)
Query: 142 RKRRRRRKPKQKEDAVATDSSPEELEAGAESELSLPEKLRPEPPGVQLEEKSSLQPKDIY 201
R+R R Q+E+ + + E A +S ++L E ++LE + SL+P
Sbjct: 378 RERCARLHETQRENLLLR-TRLGEAHAELDSLRHQVDQLAEENVELELELQRSLEPP--- 433
Query: 202 PYSDGEWPPQASLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRLPKVARAERPE 261
P S GE P L + EVR E GRL + R R
Sbjct: 434 PGSPGEAP---------LAGAAPSLQDEVREAEA-------------GRLRTLERENREL 471
Query: 262 SSV--VLEGRAGATSP----PRGGP------STPSTSVAGGVDPLGLPIQQTEAGA---D 306
+ VL+G+ G P PR P P T VA P GL + + G D
Sbjct: 472 RGLLQVLQGQPGGQHPLLEAPREDPVLPVLEEAPQTPVAFDHSPQGLVQKARDGGPQALD 531
Query: 307 LQPDTEDPTLVGP------PLHTPETEESKTQSSGDMGLPPASKSWSWATLEVPVPTGQ- 359
L P D L P P+ ES Q++ + P + WS PV T +
Sbjct: 532 LAPPALDSVLEASAECPQAPDSDPQEAESPLQAAA---MDPQASDWSPQESGSPVETQES 588
Query: 360 PERVSRGKGSPKRSQHLGPSDIYLDDLPSLDSENAALYFPQSDSGLGARRWSEPSSQKSL 419
PE+ R RS P+ + P + L +++ G A + L
Sbjct: 589 PEKAGR------RSSLQSPASVAPPQGPGTKIQAPQLLGGETE-GREAPQGELVPEAWGL 641
Query: 420 RDPNPEHEPEPT 431
R PEH+P P+
Sbjct: 642 RQEGPEHKPGPS 653
>gi|178557736 microtubule-associated protein tau isoform 5 [Homo
sapiens]
Length = 412
Score = 40.0 bits (92), Expect = 0.009
Identities = 62/245 (25%), Positives = 96/245 (39%), Gaps = 23/245 (9%)
Query: 134 AGTASTGRRKRRRRRKPKQKEDAVATDSSPEELEAGA-ESELSLPEKLRPEPPGVQLEEK 192
AGT G RK + Q ++ + +AG ES L P + E PG + +
Sbjct: 15 AGTYGLGDRKDQGGYTMHQDQEG--------DTDAGLKESPLQTPTEDGSEEPGSETSDA 66
Query: 193 SSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRLP 252
S + G+ P +AG +T + S+ + T + + A G+
Sbjct: 67 KSTPTAEAEEAGIGDTPSLEDEAAGHVTQARMVSKSKDGTGSD-----DKKAKGADGK-T 120
Query: 253 KVARAERPESSVVLEGRAGATSPPRGGPSTPSTSVAGGVDP-LGLPIQQTEAGADLQPDT 311
K+A R + +G+A AT P P P T + G P G + G+ P +
Sbjct: 121 KIA-TPRGAAPPGQKGQANATRIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGS 179
Query: 312 EDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWATLE-VPVPTGQPERVSRGKGSP 370
T P L TP T E K + + PP S S + + L+ PVP + V GS
Sbjct: 180 RSRT---PSLPTPPTREPKKVAV--VRTPPKSPSSAKSRLQTAPVPMPDLKNVKSKIGST 234
Query: 371 KRSQH 375
+ +H
Sbjct: 235 ENLKH 239
>gi|18643383 inositol 1,4,5-trisphosphate 3-kinase C [Homo sapiens]
Length = 683
Score = 39.7 bits (91), Expect = 0.012
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 9/131 (6%)
Query: 123 GTASEPEGLVMAGTASTGRRKRR--RRRKPKQKEDAVATDSSPEELEAGAESELSLPEKL 180
G+ +E E + A G R RRR+P Q+ + E G + L
Sbjct: 8 GSLNEAEAGALPAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWARTEGSSL 67
Query: 181 RPEPPGVQLEEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTPEPSPLRA 240
EP L + ++DG+ P A+ E PK +E P+ S LR
Sbjct: 68 HSEPERAGLGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQKTE-----PDRSSLR- 121
Query: 241 ESHMQWAWGRL 251
+H++W+W L
Sbjct: 122 -THLEWSWSEL 131
>gi|71274152 hypothetical protein LOC388939 [Homo sapiens]
Length = 1288
Score = 39.7 bits (91), Expect = 0.012
Identities = 70/307 (22%), Positives = 106/307 (34%), Gaps = 24/307 (7%)
Query: 91 ELESDDEHVPPGLCTSPIPWGGLSGFPSDSQLGTASEPEGLVMAGTASTGRRKRRRRRKP 150
E+E + EH+PP + S +S T + P+ G G RR P
Sbjct: 822 EMEGNLEHLPPPPMEVLMDKSFASLESPESSKSTENSPKETQEPGPGEAGPT-RRTWASP 880
Query: 151 KQKEDAVATDSSPEELEAGAESELSLPEKLRPEPPGVQLEEKSSLQPKDIYPYSDGEWPP 210
K + D P + A L+ P P +SS QP+ P D PP
Sbjct: 881 KLRASVSPLDLLPSKSTAS----LTKPHSTGPG------SGRSSCQPRK--PALDLSSPP 928
Query: 211 QASLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRL-PKVARAERPESSVVLEGR 269
S SP+ + + + L + AW P + ESS+ +
Sbjct: 929 ATS------QSPEVKGGTWSQAEKATSLYRQPRKAIAWHHSGPPSGQNRTSESSLARPRQ 982
Query: 270 AGATSPPRGGPSTPS-TSVAGGVDPLGLPIQQTEAGADLQPD---TEDPTLVGPPLHTPE 325
+ SPP G ++P+ T D + + A P T V P + +P
Sbjct: 983 SRERSPPVGRKASPTRTHWVPQADKRRRSLPSSYRPAQPSPSAVQTPPSPPVSPRVLSPP 1042
Query: 326 TEESKTQSSGDMGLPPASKSWSWATLEVPVPTGQPERVSRGKGSPKRSQHLGPSDIYLDD 385
T + +T LP + A +VP P Q S P S + PS + +
Sbjct: 1043 TTKRRTSPPHQPKLPNPPPESAPAQCKVPSPPTQHPEASPPFSIPSPSPPMSPSQEHKET 1102
Query: 386 LPSLDSE 392
S DS+
Sbjct: 1103 RDSEDSQ 1109
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 39.3 bits (90), Expect = 0.016
Identities = 65/273 (23%), Positives = 100/273 (36%), Gaps = 40/273 (14%)
Query: 180 LRPEPPGVQLEEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTPEPSPLR 239
L P PP Q E P P++ E PP+ L A +P+ + + EP+P
Sbjct: 94 LLPSPPPSQERE----HPSSSMPFA--ECPPEGCL-ASPAAAPEDGPQTQSPRREPAP-N 145
Query: 240 AESHMQWAWGRLPKVARAERPESSVVLEGRAGATSPPRGGPSTPSTSVAGGVD------- 292
A + A+ P + P + AG P+ S S + G+D
Sbjct: 146 APGDIAAAF---PAERDSSTPYQEIAAVPSAGRERQPKEEGQKSSFSFSSGIDQSPGMSP 202
Query: 293 -PLGLPIQQTEAGADLQP---DTEDPTLVG--PPLHTPETEESKTQSSGDMGLPPASKSW 346
PL P++ G QP ++++ G PP + + S Q + + +
Sbjct: 203 VPLREPMKAPLCGEGDQPGGFESQEKEAAGGFPPAESRQGVAS-VQVTPEAPAAAQQGTE 261
Query: 347 SWATLE-------VPVPTGQPERVSRGKGSPKRSQHLGPSDIYLDDLPSLDSENAALYFP 399
S A LE P+P R S +R Q P DDL L A + P
Sbjct: 262 SSAVLEKSPLKPMAPIPQDPAPRAS----DRERGQGEAPPQYLTDDLEFL----RACHLP 313
Query: 400 QSDSGLGARRWSEPSSQKSLRDPNPEHEPEPTL 432
+S+SG +SQ+S + P + P L
Sbjct: 314 RSNSGAAPEAEVNAASQESCQQPVGAYLPHAEL 346
>gi|154800453 tastin isoform 1 [Homo sapiens]
Length = 778
Score = 38.9 bits (89), Expect = 0.020
Identities = 49/180 (27%), Positives = 68/180 (37%), Gaps = 32/180 (17%)
Query: 182 PEPPGVQLEEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTPEPSPLRAE 241
PE P L+E+ + PY E P S E P+S + ++ PEP P AE
Sbjct: 531 PEIPEPSLQEQLEVPE----PYPPAEPRPLESCCRSEPEIPESSRQEQLEVPEPCP-PAE 585
Query: 242 SHMQWAWGRL-PKVARAERPESSVVLEGRAGATSPPRGGPSTPSTSVAGGVDPLGLPIQQ 300
++ R+ P++ + R E V E P GP PST G P G P +
Sbjct: 586 PRPLESYCRIEPEIPESSRQEQLEVPE----PCPPAEPGPLQPSTQGQSG--PPG-PCPR 638
Query: 301 TEAGADLQPDTEDPTLVGPPLHTPETEESKTQSSGDMGLPPASKSWSWATLEVPVPTGQP 360
E GA P T E ++ S LPP W+ AT + + P
Sbjct: 639 VELGAS----------------EPCTLEHRSLES---SLPPCCSQWAPATTSLIFSSQHP 679
>gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens]
Length = 516
Score = 38.5 bits (88), Expect = 0.027
Identities = 42/165 (25%), Positives = 62/165 (37%), Gaps = 20/165 (12%)
Query: 240 AESHMQWAWGRLPKVARAERPESSVVLEGRAGATSPPRGGPSTP--STSVAGGVDPLGLP 297
A+ H +A R ++ E P + A PP+GGP P + + AG P LP
Sbjct: 129 ADPHKVYALSR--ELCWREGPGTDQTEAEAPAAVPPPQGGPPGPFLAHTHAGLQAPGPLP 186
Query: 298 IQQTEAGADLQPDTEDPTLVGPPLHTP---ETEESKTQSSGDMGLP-----------PAS 343
+ G L + L L + +K G GLP PA
Sbjct: 187 APAGDKGDLLLQAVQQSCLADHLLTASWGADPVPTKAPGEGQEGLPLTGACAGGPGLPAG 246
Query: 344 KSWSWATLEVPVPTGQPERVSRGKGSPKRSQHLGPSDIYLDDLPS 388
+ + WA P P QP ++ G+ + S H ++ YL PS
Sbjct: 247 ELYGWAVETTPSPGPQPAALTTGEAAAPESPH--QAEPYLSPSPS 289
>gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens]
Length = 503
Score = 38.5 bits (88), Expect = 0.027
Identities = 42/165 (25%), Positives = 62/165 (37%), Gaps = 20/165 (12%)
Query: 240 AESHMQWAWGRLPKVARAERPESSVVLEGRAGATSPPRGGPSTP--STSVAGGVDPLGLP 297
A+ H +A R ++ E P + A PP+GGP P + + AG P LP
Sbjct: 116 ADPHKVYALSR--ELCWREGPGTDQTEAEAPAAVPPPQGGPPGPFLAHTHAGLQAPGPLP 173
Query: 298 IQQTEAGADLQPDTEDPTLVGPPLHTP---ETEESKTQSSGDMGLP-----------PAS 343
+ G L + L L + +K G GLP PA
Sbjct: 174 APAGDKGDLLLQAVQQSCLADHLLTASWGADPVPTKAPGEGQEGLPLTGACAGGPGLPAG 233
Query: 344 KSWSWATLEVPVPTGQPERVSRGKGSPKRSQHLGPSDIYLDDLPS 388
+ + WA P P QP ++ G+ + S H ++ YL PS
Sbjct: 234 ELYGWAVETTPSPGPQPAALTTGEAAAPESPH--QAEPYLSPSPS 276
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 38.5 bits (88), Expect = 0.027
Identities = 75/299 (25%), Positives = 103/299 (34%), Gaps = 55/299 (18%)
Query: 160 DSSPEELEAGAESEL---------SLPEKLRPEPPGVQLEEKSSLQPKDIYPYSDGEWPP 210
D++P E + A SE S+P++ P PP + EEK P P + E P
Sbjct: 410 DTTPPETDPAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAP-EPEREAETEP 468
Query: 211 QASLSAGELTSPKSDSELEVRTPEPSPLRAESHMQWAWGRLPKVARAERPESSVVLEGRA 270
+ G T P+ P PSP PK RP ++
Sbjct: 469 E----RGAGTEPERIGTEPSTAPAPSP------------PAPKSCLKHRPAAA----SEG 508
Query: 271 GATSPPRGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQPDTEDPTLVGPPLHTPETEESK 330
A SPP +P V+P G EA A +P E PP +
Sbjct: 509 PAASPPLAAAESPP------VEP-GPGSLDAEAAAPERPKAE--RAEAPPAGAERAAPER 559
Query: 331 TQSSGDMGLPPASKSWSWATLEVPVP-TGQPERVSRGKGSPKRSQHLGPSDIYLDDLPSL 389
G L A K + P P +P + G+ RS + S+ LDDL L
Sbjct: 560 KAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGL 619
Query: 390 DSENAALYFPQ-------SDSG------LGARRW-SEPSSQKSLRDPNP-EHEPEPTLD 433
A P+ DSG G R+ E ++ R+P P EP P+ D
Sbjct: 620 PEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSED 678
>gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo
sapiens]
Length = 946
Score = 38.5 bits (88), Expect = 0.027
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 100 PPGLCTSPIPWGGLSGFPSDSQLGTASEPEGLVMAGTASTGRRKRRRRRKPKQKEDAVAT 159
PP SP G+ S + +S G +G++ + R R +Q+ A T
Sbjct: 59 PPAESLSPEEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDRQQVVAAGT 118
Query: 160 DSSPEELEAGAESELSLPEKLRPEPPGVQLEEKSSLQPKDIYPYSDGEWPPQASLSAGEL 219
S P EA + + L+ E VQ+ +K + I QA SA +
Sbjct: 119 LSPPGPEEAKRKLRI-----LQRELQNVQVNQKVGMFEAHI----------QAQSSA--I 161
Query: 220 TSPKSDSELEVRTPEPSPLRAESHMQWAWGR-LPKVARAERPESSVVLE---GRAGATSP 275
+P+S R+P P P R+ S GR L + AR+E + E +G S
Sbjct: 162 QAPRSPRLGRARSPSPCPFRSSSQPP---GRVLVQGARSEERRTKSWGEQCPETSGTDSG 218
Query: 276 PRGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQ 308
+GGPS S+ V G+ P LP + G++ Q
Sbjct: 219 RKGGPSLCSSQVKKGMPP--LPGRAAPTGSEAQ 249
Score = 37.4 bits (85), Expect = 0.059
Identities = 57/194 (29%), Positives = 73/194 (37%), Gaps = 24/194 (12%)
Query: 106 SPIPWGGLSGFPSDSQLGTASEPEGLVMAGTASTGRRKRRRRRKPKQKEDAVATDSSPEE 165
SP P PS G + V A STG P + +D T+ S
Sbjct: 280 SPTPGTRSCLAPSLGLFGASLTMATEVAARVTSTG---------PHRPQDLALTEPSGRA 330
Query: 166 LEAGAESELSLPEKLRPEPPGVQLEEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSD 225
E +L PE L E G L ++S P+ P DGE P + P S
Sbjct: 331 REL---EDLQPPEAL-VERQGQFLGSETSPAPERGGP-RDGEPPGKMGKGYLPCGMPGSG 385
Query: 226 SELEVRTPEPSPLR---AESHMQWAWGRLPKVARAERPESSVVLEGRAGATSPPRGGPST 282
+ PE + + AES +W RLP+ + PE E R+GA P GG
Sbjct: 386 EPEVGKRPEETTVSVQSAESSDSLSWSRLPRALASVGPE-----EARSGA--PVGGGRWQ 438
Query: 283 PSTSVAGGVDPLGL 296
S V GG LGL
Sbjct: 439 LSDRVEGGSPTLGL 452
>gi|109715844 BCL2/adenovirus E1B 19kD interacting protein like
isoform a [Homo sapiens]
Length = 357
Score = 38.1 bits (87), Expect = 0.035
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 21/169 (12%)
Query: 167 EAGAESELSLPEKLRPEPPGVQLEEKSSLQPKDIYPYSDGEWP---PQASLSAGELTSPK 223
EAG ++++ + E G L L+ K+ + D E+P P+ + ++ + PK
Sbjct: 6 EAGKKTDVGVREIAEAPELGAALRH-GELELKE--EWQDEEFPRLLPEEAGTSEDPEDPK 62
Query: 224 SDSELEVRTPEPSPLRAESHMQWAWGRLPKVARAERPESSVVLEGRAG--ATSPPRGGPS 281
DS+ TP L G+ P R PE + L G SP + PS
Sbjct: 63 GDSQAAAGTPSTLAL---------CGQRPMRKRLSAPELRLSLTKGPGNDGASPTQSAPS 113
Query: 282 TPSTSVAGGVDPLGLP--IQQTEAGADLQPDTEDPTLVGPPLHTPETEE 328
+P S +D L P +Q ++G + + + E P G L T ET E
Sbjct: 114 SPDGSSDLEIDELETPSDSEQLDSGHEFEWEDELPRAEG--LGTSETAE 160
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,258,083
Number of Sequences: 37866
Number of extensions: 2162716
Number of successful extensions: 8801
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 370
Number of HSP's that attempted gapping in prelim test: 8162
Number of HSP's gapped (non-prelim): 1010
length of query: 851
length of database: 18,247,518
effective HSP length: 111
effective length of query: 740
effective length of database: 14,044,392
effective search space: 10392850080
effective search space used: 10392850080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.