Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: LPIN2 Sequence: fasta or formatted (896aa) NCBI GI: 7662022
Description:

lipin 2

Referenced in:

Adipose Tissue
Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         57           3
 C cysteine            1.7         15           1
 D aspartate           6.7         60           3
 E glutamate           8.4         75           3
 F phenylalanine       3.1         28           2
 G glycine             5.8         52           2
 H histidine           2.5         22           2
 I isoleucine          5.0         45           3
 K lysine              7.7         69           4
 L leucine             7.9         71           2
 M methionine          1.6         14           1
 N asparagine          3.1         28           1
 P proline             7.0         63           2
 Q glutamine           3.8         34           3
 R arginine            3.5         31           3
 S serine             11.2        100           3
 T threonine           5.2         47           2
 V valine              5.0         45           2
 W tryptophan          1.6         14           2
 Y tyrosine            2.9         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lipin 2 
LPIN1                 0.469   lipin 1 
LPIN3                 0.434   lipin 3 
TRDN                  0.014   triadin 
AP3B1                 0.009   adaptor-related protein complex 3, beta 1 subunit [H...
SYTL2                 0.008   synaptotagmin-like 2 isoform i 
SYTL2                 0.008   synaptotagmin-like 2 isoform g 
IWS1                  0.008   IWS1 homolog 
DCAF6                 0.008   IQ motif and WD repeats 1 isoform a 
PMS2                  0.008   PMS2 postmeiotic segregation increased 2 isoform a [H...
TCOF1                 0.008   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.008   Treacher Collins-Franceschetti syndrome 1 isoform b ...
MAST2                 0.007   microtubule associated serine/threonine kinase 2 [H...
RBMX2                 0.007   RNA binding motif protein, X-linked 2 
NOLC1                 0.007   nucleolar and coiled-body phosphoprotein 1 
RP1L1                 0.007   retinitis pigmentosa 1-like 1 
DCAF6                 0.007   IQ motif and WD repeats 1 isoform b 
AKAP12                0.007   A kinase (PRKA) anchor protein 12 isoform 1 
AKAP12                0.007   A kinase (PRKA) anchor protein 12 isoform 2 
E2F7                  0.007   E2F transcription factor 7 
C8orf47               0.007   hypothetical protein LOC203111 
TTK                   0.006   TTK protein kinase 
LOXHD1                0.006   lipoxygenase homology domains 1 isoform 1 
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform c ...
SETD1B                0.006   SET domain containing 1B 
TTF1                  0.006   transcription termination factor, RNA polymerase I [...
NKAP                  0.006   NFKB activating protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press