ARNTL 35261

Name: ARNTL	Sequence: fasta or formatted (582aa)		NCBI GI: 71852582
Description: aryl hydrocarbon receptor nuclear translocator-like isoform b		Referenced in: Circadian Rhythms
Other entries for this name: alt prot [625aa] aryl hydrocarbon receptor nuclear translocator-like isoform a alt prot [625aa] aryl hydrocarbon receptor nuclear translocator-like isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 31 2 C cysteine 2.2 13 1 D aspartate 6.9 40 2 E glutamate 5.5 32 2 F phenylalanine 3.4 20 2 G glycine 7.7 45 2 H histidine 2.9 17 1 I isoleucine 6.2 36 1 K lysine 6.2 36 3 L leucine 8.1 47 2 M methionine 2.9 17 1 N asparagine 4.0 23 1 P proline 7.0 41 3 Q glutamine 2.7 16 1 R arginine 5.5 32 3 S serine 9.8 57 3 T threonine 5.7 33 2 V valine 4.8 28 2 W tryptophan 0.7 4 1 Y tyrosine 2.4 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.994 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.994 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL2 0.463 aryl hydrocarbon receptor nuclear translocator-like ... ARNT 0.259 aryl hydrocarbon receptor nuclear translocator isofo... ARNT 0.259 aryl hydrocarbon receptor nuclear translocator isofor... ARNT2 0.253 aryl hydrocarbon receptor nuclear translocator 2 [Ho... ARNT 0.182 aryl hydrocarbon receptor nuclear translocator isofo... CLOCK 0.117 clock NPAS2 0.110 neuronal PAS domain protein 2 HIF1A 0.096 hypoxia-inducible factor 1, alpha subunit isoform 2 ... HIF1A 0.096 hypoxia-inducible factor 1, alpha subunit isoform 1 [... EPAS1 0.095 endothelial PAS domain protein 1 SIM1 0.090 single-minded homolog 1 SIM2 0.085 single-minded homolog 2 long isoform SIM2 0.085 single-minded homolog 2 short isoform HIF3A 0.075 hypoxia inducible factor 3, alpha subunit isoform a ... HIF3A 0.070 hypoxia inducible factor 3, alpha subunit isoform c ... NPAS3 0.070 neuronal PAS domain protein 3 isoform 1 NPAS3 0.064 neuronal PAS domain protein 3 isoform 2 NPAS1 0.064 neuronal PAS domain protein 1 AHR 0.059 aryl hydrocarbon receptor NCOA3 0.058 nuclear receptor coactivator 3 isoform a NCOA3 0.058 nuclear receptor coactivator 3 isoform b HIF3A 0.058 hypoxia inducible factor 3, alpha subunit isoform b ... PER2 0.053 period 2 PER3 0.052 period 3 NCOA1 0.048 nuclear receptor coactivator 1 isoform 2 NCOA1 0.048 nuclear receptor coactivator 1 isoform 3 NCOA1 0.048 nuclear receptor coactivator 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.