NCOA1 15086

Name: NCOA1	Sequence: fasta or formatted (1440aa)		NCBI GI: 22538459
Description: nuclear receptor coactivator 1 isoform 3		Referenced in: Nuclear Receptors Helix-Loop-Helix Transcription Factors
Other entries for this name: alt prot [1441aa] nuclear receptor coactivator 1 isoform 1 alt prot [1399aa] nuclear receptor coactivator 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 79 2 C cysteine 1.6 23 1 D aspartate 4.7 67 3 E glutamate 4.7 68 2 F phenylalanine 2.4 34 3 G glycine 6.4 92 3 H histidine 1.5 21 1 I isoleucine 4.0 57 2 K lysine 3.8 55 3 L leucine 8.9 128 3 M methionine 3.5 50 2 N asparagine 6.4 92 4 P proline 8.6 124 3 Q glutamine 9.3 134 3 R arginine 4.4 64 3 S serine 11.9 172 4 T threonine 6.0 87 3 V valine 4.7 67 2 W tryptophan 0.3 4 1 Y tyrosine 1.5 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear receptor coactivator 1 isoform 3 NCOA1 0.998 nuclear receptor coactivator 1 isoform 1 NCOA1 0.962 nuclear receptor coactivator 1 isoform 2 NCOA2 0.197 nuclear receptor coactivator 2 NCOA3 0.165 nuclear receptor coactivator 3 isoform a NCOA3 0.165 nuclear receptor coactivator 3 isoform b SIM1 0.024 single-minded homolog 1 ARNT2 0.022 aryl hydrocarbon receptor nuclear translocator 2 [Ho... CLOCK 0.021 clock SIM2 0.020 single-minded homolog 2 long isoform SIM2 0.020 single-minded homolog 2 short isoform ARNTL 0.020 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.020 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.020 aryl hydrocarbon receptor nuclear translocator-like ... NPAS2 0.019 neuronal PAS domain protein 2 HIF1A 0.017 hypoxia-inducible factor 1, alpha subunit isoform 2 ... HIF1A 0.017 hypoxia-inducible factor 1, alpha subunit isoform 1 [... ARNT 0.017 aryl hydrocarbon receptor nuclear translocator isofo... ARNT 0.017 aryl hydrocarbon receptor nuclear translocator isofor... ARNTL2 0.017 aryl hydrocarbon receptor nuclear translocator-like ... AHRR 0.017 arylhydrocarbon receptor repressor ARNT 0.016 aryl hydrocarbon receptor nuclear translocator isofo... NPAS3 0.016 neuronal PAS domain protein 3 isoform 1 HIF3A 0.016 hypoxia inducible factor 3, alpha subunit isoform a ... HIF3A 0.016 hypoxia inducible factor 3, alpha subunit isoform c ... AHR 0.016 aryl hydrocarbon receptor NPAS1 0.015 neuronal PAS domain protein 1 DSPP 0.015 dentin sialophosphoprotein preproprotein HIF3A 0.015 hypoxia inducible factor 3, alpha subunit isoform b ... EPAS1 0.015 endothelial PAS domain protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.