Guide to the Human Genome
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Name: ARNTL2 Sequence: fasta or formatted (636aa) NCBI GI: 31745180
Description:

aryl hydrocarbon receptor nuclear translocator-like 2

Referenced in:

Circadian Rhythms

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         35           3
 C cysteine            2.0         13           1
 D aspartate           5.0         32           2
 E glutamate           7.1         45           3
 F phenylalanine       4.2         27           2
 G glycine             6.3         40           2
 H histidine           2.8         18           1
 I isoleucine          4.1         26           1
 K lysine              6.6         42           3
 L leucine             9.1         58           2
 M methionine          2.7         17           1
 N asparagine          4.4         28           2
 P proline             4.4         28           2
 Q glutamine           4.2         27           1
 R arginine            5.3         34           3
 S serine             11.5         73           3
 T threonine           5.7         36           1
 V valine              5.8         37           2
 W tryptophan          0.6          4           1
 Y tyrosine            2.5         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aryl hydrocarbon receptor nuclear translocator-like ... 
ARNTL                 0.438   aryl hydrocarbon receptor nuclear translocator-like ...
ARNTL                 0.438   aryl hydrocarbon receptor nuclear translocator-like ...
ARNTL                 0.432   aryl hydrocarbon receptor nuclear translocator-like ...
ARNT                  0.219   aryl hydrocarbon receptor nuclear translocator isofor...
ARNT                  0.218   aryl hydrocarbon receptor nuclear translocator isofo...
ARNT2                 0.204   aryl hydrocarbon receptor nuclear translocator 2 [Ho...
ARNT                  0.139   aryl hydrocarbon receptor nuclear translocator isofo...
EPAS1                 0.095   endothelial PAS domain protein 1 
CLOCK                 0.095   clock 
HIF1A                 0.090   hypoxia-inducible factor 1, alpha subunit isoform 2 ...
HIF1A                 0.090   hypoxia-inducible factor 1, alpha subunit isoform 1 [...
NPAS2                 0.084   neuronal PAS domain protein 2 
HIF3A                 0.077   hypoxia inducible factor 3, alpha subunit isoform a ...
HIF3A                 0.075   hypoxia inducible factor 3, alpha subunit isoform c ...
SIM1                  0.075   single-minded homolog 1 
SIM2                  0.072   single-minded homolog 2 long isoform 
SIM2                  0.072   single-minded homolog 2 short isoform 
PER2                  0.067   period 2 
NPAS3                 0.066   neuronal PAS domain protein 3 isoform 1 
HIF3A                 0.064   hypoxia inducible factor 3, alpha subunit isoform b ...
NPAS1                 0.064   neuronal PAS domain protein 1 
NPAS3                 0.062   neuronal PAS domain protein 3 isoform 2 
PER3                  0.048   period 3 
NCOA2                 0.047   nuclear receptor coactivator 2 
NCOA3                 0.045   nuclear receptor coactivator 3 isoform a 
NCOA3                 0.045   nuclear receptor coactivator 3 isoform b 
AHR                   0.039   aryl hydrocarbon receptor 
NCOA1                 0.039   nuclear receptor coactivator 1 isoform 2 
NCOA1                 0.039   nuclear receptor coactivator 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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