CLOCK 30593

Name: CLOCK	Sequence: fasta or formatted (846aa)		NCBI GI: 4758010
Description: clock		Referenced in: Circadian Rhythms Neurons
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 37 2 C cysteine 1.1 9 2 D aspartate 3.9 33 2 E glutamate 5.4 46 2 F phenylalanine 4.0 34 2 G glycine 4.3 36 1 H histidine 3.5 30 2 I isoleucine 4.5 38 2 K lysine 4.1 35 2 L leucine 8.4 71 2 M methionine 3.0 25 1 N asparagine 3.3 28 1 P proline 5.4 46 2 Q glutamine 12.1 102 6 R arginine 4.4 37 3 S serine 12.4 105 3 T threonine 7.7 65 2 V valine 5.3 45 2 W tryptophan 0.6 5 1 Y tyrosine 2.2 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 clock NPAS2 0.437 neuronal PAS domain protein 2 ARNTL 0.082 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.082 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.082 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL2 0.072 aryl hydrocarbon receptor nuclear translocator-like ... EPAS1 0.068 endothelial PAS domain protein 1 ARNT 0.063 aryl hydrocarbon receptor nuclear translocator isofo... ARNT 0.063 aryl hydrocarbon receptor nuclear translocator isofor... HIF1A 0.063 hypoxia-inducible factor 1, alpha subunit isoform 2 ... HIF1A 0.063 hypoxia-inducible factor 1, alpha subunit isoform 1 [... HIF3A 0.056 hypoxia inducible factor 3, alpha subunit isoform c ... HIF3A 0.056 hypoxia inducible factor 3, alpha subunit isoform a ... SIM1 0.053 single-minded homolog 1 ARNT2 0.051 aryl hydrocarbon receptor nuclear translocator 2 [Ho... SIM2 0.048 single-minded homolog 2 long isoform SIM2 0.048 single-minded homolog 2 short isoform HIF3A 0.047 hypoxia inducible factor 3, alpha subunit isoform b ... PASD1 0.047 PAS domain containing 1 AHR 0.045 aryl hydrocarbon receptor NCOA2 0.039 nuclear receptor coactivator 2 NPAS3 0.038 neuronal PAS domain protein 3 isoform 1 NCOA1 0.036 nuclear receptor coactivator 1 isoform 2 NCOA1 0.036 nuclear receptor coactivator 1 isoform 3 NCOA1 0.036 nuclear receptor coactivator 1 isoform 1 NPAS3 0.036 neuronal PAS domain protein 3 isoform 2 NPAS1 0.033 neuronal PAS domain protein 1 NCOA3 0.033 nuclear receptor coactivator 3 isoform a NCOA3 0.033 nuclear receptor coactivator 3 isoform b ARNT 0.030 aryl hydrocarbon receptor nuclear translocator isofo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.