ARNTL 35260

Name: ARNTL	Sequence: fasta or formatted (625aa)		NCBI GI: 71852580
Description: aryl hydrocarbon receptor nuclear translocator-like isoform a		Referenced in: Circadian Rhythms
Other entries for this name: alt mRNA [625aa] aryl hydrocarbon receptor nuclear translocator-like isoform a alt prot [582aa] aryl hydrocarbon receptor nuclear translocator-like isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 32 2 C cysteine 2.2 14 1 D aspartate 7.4 46 2 E glutamate 5.1 32 2 F phenylalanine 3.4 21 2 G glycine 7.8 49 2 H histidine 2.7 17 1 I isoleucine 5.8 36 1 K lysine 6.1 38 3 L leucine 8.0 50 2 M methionine 3.0 19 1 N asparagine 3.7 23 1 P proline 6.9 43 3 Q glutamine 2.9 18 1 R arginine 5.6 35 3 S serine 10.7 67 3 T threonine 5.9 37 2 V valine 4.6 29 2 W tryptophan 0.6 4 1 Y tyrosine 2.4 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 1.000 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.926 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL2 0.438 aryl hydrocarbon receptor nuclear translocator-like ... ARNT 0.242 aryl hydrocarbon receptor nuclear translocator isofo... ARNT 0.242 aryl hydrocarbon receptor nuclear translocator isofor... ARNT2 0.236 aryl hydrocarbon receptor nuclear translocator 2 [Ho... ARNT 0.170 aryl hydrocarbon receptor nuclear translocator isofo... CLOCK 0.109 clock NPAS2 0.102 neuronal PAS domain protein 2 HIF1A 0.090 hypoxia-inducible factor 1, alpha subunit isoform 2 ... HIF1A 0.090 hypoxia-inducible factor 1, alpha subunit isoform 1 [... EPAS1 0.089 endothelial PAS domain protein 1 SIM1 0.084 single-minded homolog 1 SIM2 0.079 single-minded homolog 2 long isoform SIM2 0.079 single-minded homolog 2 short isoform HIF3A 0.070 hypoxia inducible factor 3, alpha subunit isoform a ... HIF3A 0.066 hypoxia inducible factor 3, alpha subunit isoform c ... NPAS3 0.066 neuronal PAS domain protein 3 isoform 1 NPAS3 0.060 neuronal PAS domain protein 3 isoform 2 NPAS1 0.059 neuronal PAS domain protein 1 AHR 0.055 aryl hydrocarbon receptor NCOA3 0.054 nuclear receptor coactivator 3 isoform a NCOA3 0.054 nuclear receptor coactivator 3 isoform b HIF3A 0.054 hypoxia inducible factor 3, alpha subunit isoform b ... PER2 0.051 period 2 PER3 0.049 period 3 NCOA1 0.045 nuclear receptor coactivator 1 isoform 2 NCOA1 0.045 nuclear receptor coactivator 1 isoform 3 NCOA1 0.045 nuclear receptor coactivator 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.