EPAS1 27359

Name: EPAS1	Sequence: fasta or formatted (870aa)		NCBI GI: 40254439
Description: endothelial PAS domain protein 1		Referenced in: Oxygen Sensing and Hemoglobin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 53 3 C cysteine 2.5 22 2 D aspartate 5.1 44 2 E glutamate 6.8 59 2 F phenylalanine 4.4 38 2 G glycine 5.7 50 2 H histidine 3.1 27 1 I isoleucine 3.1 27 2 K lysine 5.7 50 2 L leucine 10.0 87 2 M methionine 3.3 29 1 N asparagine 3.8 33 2 P proline 8.0 70 2 Q glutamine 4.6 40 3 R arginine 4.0 35 2 S serine 10.9 95 5 T threonine 5.7 50 2 V valine 3.8 33 2 W tryptophan 0.7 6 1 Y tyrosine 2.5 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 endothelial PAS domain protein 1 HIF1A 0.335 hypoxia-inducible factor 1, alpha subunit isoform 1 [... HIF1A 0.333 hypoxia-inducible factor 1, alpha subunit isoform 2 ... HIF3A 0.216 hypoxia inducible factor 3, alpha subunit isoform c ... HIF3A 0.215 hypoxia inducible factor 3, alpha subunit isoform a ... HIF3A 0.177 hypoxia inducible factor 3, alpha subunit isoform b ... SIM2 0.125 single-minded homolog 2 long isoform SIM2 0.125 single-minded homolog 2 short isoform SIM1 0.124 single-minded homolog 1 NPAS3 0.116 neuronal PAS domain protein 3 isoform 1 NPAS3 0.113 neuronal PAS domain protein 3 isoform 2 NPAS1 0.100 neuronal PAS domain protein 1 ARNTL2 0.068 aryl hydrocarbon receptor nuclear translocator-like ... CLOCK 0.064 clock ARNTL 0.063 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.063 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.063 aryl hydrocarbon receptor nuclear translocator-like ... ARNT2 0.063 aryl hydrocarbon receptor nuclear translocator 2 [Ho... NPAS2 0.063 neuronal PAS domain protein 2 ARNT 0.063 aryl hydrocarbon receptor nuclear translocator isofor... ARNT 0.062 aryl hydrocarbon receptor nuclear translocator isofo... AHR 0.047 aryl hydrocarbon receptor NPAS4 0.036 neuronal PAS domain protein 4 ARNT 0.030 aryl hydrocarbon receptor nuclear translocator isofo... NCOA2 0.027 nuclear receptor coactivator 2 NCOA3 0.025 nuclear receptor coactivator 3 isoform a NCOA3 0.025 nuclear receptor coactivator 3 isoform b NCOA1 0.024 nuclear receptor coactivator 1 isoform 2 NCOA1 0.024 nuclear receptor coactivator 1 isoform 3 NCOA1 0.024 nuclear receptor coactivator 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.