HIF3A 15747

Name: HIF3A	Sequence: fasta or formatted (667aa)		NCBI GI: 23065535
Description: hypoxia inducible factor 3, alpha subunit isoform a		Referenced in: Oxygen Sensing and Hemoglobin
Other entries for this name: alt prot [669aa] hypoxia inducible factor 3, alpha subunit isoform c alt prot [613aa] hypoxia inducible factor 3, alpha subunit isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 59 2 C cysteine 1.8 12 1 D aspartate 6.3 42 3 E glutamate 6.0 40 2 F phenylalanine 2.7 18 1 G glycine 7.0 47 2 H histidine 3.0 20 1 I isoleucine 2.7 18 1 K lysine 2.5 17 1 L leucine 12.6 84 2 M methionine 1.6 11 1 N asparagine 1.5 10 1 P proline 9.3 62 2 Q glutamine 4.5 30 2 R arginine 6.9 46 2 S serine 10.5 70 2 T threonine 5.4 36 2 V valine 3.9 26 2 W tryptophan 0.7 5 1 Y tyrosine 2.1 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypoxia inducible factor 3, alpha subunit isoform a ... HIF3A 0.988 hypoxia inducible factor 3, alpha subunit isoform c ... HIF3A 0.920 hypoxia inducible factor 3, alpha subunit isoform b ... HIF1A 0.285 hypoxia-inducible factor 1, alpha subunit isoform 2 ... HIF1A 0.285 hypoxia-inducible factor 1, alpha subunit isoform 1 [... EPAS1 0.285 endothelial PAS domain protein 1 SIM1 0.154 single-minded homolog 1 SIM2 0.154 single-minded homolog 2 long isoform SIM2 0.154 single-minded homolog 2 short isoform NPAS3 0.144 neuronal PAS domain protein 3 isoform 1 NPAS3 0.138 neuronal PAS domain protein 3 isoform 2 NPAS1 0.136 neuronal PAS domain protein 1 ARNTL2 0.073 aryl hydrocarbon receptor nuclear translocator-like ... ARNT2 0.070 aryl hydrocarbon receptor nuclear translocator 2 [Ho... CLOCK 0.070 clock ARNT 0.066 aryl hydrocarbon receptor nuclear translocator isofor... ARNTL 0.066 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.066 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.066 aryl hydrocarbon receptor nuclear translocator-like ... ARNT 0.064 aryl hydrocarbon receptor nuclear translocator isofo... NPAS2 0.063 neuronal PAS domain protein 2 AHR 0.054 aryl hydrocarbon receptor NPAS4 0.054 neuronal PAS domain protein 4 AHRR 0.035 arylhydrocarbon receptor repressor NCOA1 0.034 nuclear receptor coactivator 1 isoform 2 NCOA1 0.034 nuclear receptor coactivator 1 isoform 3 NCOA1 0.034 nuclear receptor coactivator 1 isoform 1 NCOA2 0.033 nuclear receptor coactivator 2 NCOA3 0.031 nuclear receptor coactivator 3 isoform a NCOA3 0.031 nuclear receptor coactivator 3 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.