HIF1A 28831

Name: HIF1A	Sequence: fasta or formatted (826aa)		NCBI GI: 4504385
Description: hypoxia-inducible factor 1, alpha subunit isoform 1		Referenced in: Oxygen Sensing and Hemoglobin
Other entries for this name: alt prot [735aa] hypoxia-inducible factor 1, alpha subunit isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 43 2 C cysteine 1.8 15 1 D aspartate 6.9 57 3 E glutamate 7.4 61 3 F phenylalanine 2.9 24 2 G glycine 4.1 34 2 H histidine 2.7 22 2 I isoleucine 4.2 35 2 K lysine 6.1 50 3 L leucine 10.0 83 2 M methionine 3.4 28 1 N asparagine 4.0 33 1 P proline 6.1 50 2 Q glutamine 5.7 47 2 R arginine 4.2 35 2 S serine 9.4 78 3 T threonine 8.0 66 4 V valine 4.8 40 2 W tryptophan 0.4 3 1 Y tyrosine 2.7 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypoxia-inducible factor 1, alpha subunit isoform 1 [... HIF1A 0.888 hypoxia-inducible factor 1, alpha subunit isoform 2 ... EPAS1 0.360 endothelial PAS domain protein 1 HIF3A 0.232 hypoxia inducible factor 3, alpha subunit isoform c ... HIF3A 0.231 hypoxia inducible factor 3, alpha subunit isoform a ... HIF3A 0.193 hypoxia inducible factor 3, alpha subunit isoform b ... SIM2 0.153 single-minded homolog 2 long isoform SIM2 0.153 single-minded homolog 2 short isoform SIM1 0.150 single-minded homolog 1 NPAS3 0.136 neuronal PAS domain protein 3 isoform 1 NPAS3 0.132 neuronal PAS domain protein 3 isoform 2 NPAS1 0.115 neuronal PAS domain protein 1 ARNTL 0.069 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.069 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.069 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL2 0.069 aryl hydrocarbon receptor nuclear translocator-like ... CLOCK 0.064 clock ARNT 0.064 aryl hydrocarbon receptor nuclear translocator isofo... NPAS2 0.063 neuronal PAS domain protein 2 ARNT 0.063 aryl hydrocarbon receptor nuclear translocator isofor... ARNT2 0.060 aryl hydrocarbon receptor nuclear translocator 2 [Ho... AHR 0.059 aryl hydrocarbon receptor NPAS4 0.040 neuronal PAS domain protein 4 NCOA2 0.031 nuclear receptor coactivator 2 NCOA1 0.030 nuclear receptor coactivator 1 isoform 2 NCOA1 0.030 nuclear receptor coactivator 1 isoform 3 NCOA1 0.030 nuclear receptor coactivator 1 isoform 1 ARNT 0.030 aryl hydrocarbon receptor nuclear translocator isofo... NCOA3 0.027 nuclear receptor coactivator 3 isoform a NCOA3 0.027 nuclear receptor coactivator 3 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.