HIF1A 25347

Name: HIF1A	Sequence: fasta or formatted (735aa)		NCBI GI: 31077211
Description: hypoxia-inducible factor 1, alpha subunit isoform 2		Referenced in: Oxygen Sensing and Hemoglobin
Other entries for this name: alt prot [826aa] hypoxia-inducible factor 1, alpha subunit isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 38 2 C cysteine 1.6 12 1 D aspartate 6.9 51 3 E glutamate 7.5 55 3 F phenylalanine 3.3 24 2 G glycine 3.7 27 2 H histidine 2.9 21 2 I isoleucine 4.4 32 2 K lysine 6.3 46 3 L leucine 9.4 69 2 M methionine 3.5 26 1 N asparagine 3.9 29 1 P proline 6.3 46 2 Q glutamine 5.2 38 2 R arginine 4.2 31 2 S serine 9.4 69 3 T threonine 8.3 61 4 V valine 5.0 37 2 W tryptophan 0.3 2 1 Y tyrosine 2.9 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypoxia-inducible factor 1, alpha subunit isoform 2 ... HIF1A 0.999 hypoxia-inducible factor 1, alpha subunit isoform 1 [... EPAS1 0.403 endothelial PAS domain protein 1 HIF3A 0.261 hypoxia inducible factor 3, alpha subunit isoform c ... HIF3A 0.260 hypoxia inducible factor 3, alpha subunit isoform a ... HIF3A 0.217 hypoxia inducible factor 3, alpha subunit isoform b ... SIM2 0.172 single-minded homolog 2 long isoform SIM2 0.172 single-minded homolog 2 short isoform SIM1 0.168 single-minded homolog 1 NPAS3 0.153 neuronal PAS domain protein 3 isoform 1 NPAS3 0.148 neuronal PAS domain protein 3 isoform 2 NPAS1 0.129 neuronal PAS domain protein 1 ARNTL 0.077 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.077 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.077 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL2 0.077 aryl hydrocarbon receptor nuclear translocator-like ... CLOCK 0.072 clock ARNT 0.072 aryl hydrocarbon receptor nuclear translocator isofo... NPAS2 0.071 neuronal PAS domain protein 2 ARNT 0.070 aryl hydrocarbon receptor nuclear translocator isofor... ARNT2 0.068 aryl hydrocarbon receptor nuclear translocator 2 [Ho... AHR 0.066 aryl hydrocarbon receptor NPAS4 0.045 neuronal PAS domain protein 4 NCOA2 0.034 nuclear receptor coactivator 2 NCOA1 0.034 nuclear receptor coactivator 1 isoform 2 NCOA1 0.034 nuclear receptor coactivator 1 isoform 3 NCOA1 0.034 nuclear receptor coactivator 1 isoform 1 ARNT 0.034 aryl hydrocarbon receptor nuclear translocator isofo... NCOA3 0.030 nuclear receptor coactivator 3 isoform a NCOA3 0.030 nuclear receptor coactivator 3 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.