Guide to the Human Genome
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Name: HARS Sequence: fasta or formatted (509aa) NCBI GI: 6996014
Description:

histidyl-tRNA synthetase

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         32           2
 C cysteine            2.0         10           1
 D aspartate           6.5         33           2
 E glutamate           9.4         48           3
 F phenylalanine       3.1         16           1
 G glycine             7.7         39           2
 H histidine           0.6          3           1
 I isoleucine          5.9         30           2
 K lysine              8.4         43           2
 L leucine            12.6         64           2
 M methionine          2.0         10           1
 N asparagine          1.8          9           1
 P proline             3.3         17           1
 Q glutamine           4.7         24           2
 R arginine            6.5         33           2
 S serine              4.5         23           2
 T threonine           3.1         16           2
 V valine              7.9         40           1
 W tryptophan          0.4          2           1
 Y tyrosine            3.3         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   histidyl-tRNA synthetase 
HARS2                 0.735   histidyl-tRNA synthetase 2 precursor 
EIF2AK4               0.120   eukaryotic translation initiation factor 2 alpha kin...
MARS                  0.015   methionyl-tRNA synthetase 
CEP250                0.012   centrosomal protein 2 
KIAA1984              0.012   hypothetical protein LOC84960 
CEP110                0.010   centrosomal protein 110kDa 
LRRFIP1               0.010   leucine rich repeat (in FLII) interacting protein 1...
LRRFIP1               0.010   leucine rich repeat (in FLII) interacting protein 1...
LRRFIP2               0.008   leucine rich repeat (in FLII) interacting protein 2...
LRRFIP2               0.008   leucine rich repeat (in FLII) interacting protein 2 i...
EPRS                  0.008   glutamyl-prolyl tRNA synthetase 
TPM1                  0.007   tropomyosin 1 alpha chain isoform 5 
LOC100133220          0.007   PREDICTED: hypothetical protein 
KIF3C                 0.007   kinesin family member 3C 
TPM1                  0.006   tropomyosin 1 alpha chain isoform 7 
TPM1                  0.006   tropomyosin 1 alpha chain isoform 4 
CCDC41                0.006   NY-REN-58 antigen 
CCDC41                0.006   NY-REN-58 antigen 
KDM5C                 0.005   jumonji, AT rich interactive domain 1C isoform 2 [H...
KDM5C                 0.005   jumonji, AT rich interactive domain 1C isoform 1 [H...
MAP1A                 0.005   microtubule-associated protein 1A 
ABCC3                 0.005   ATP-binding cassette, sub-family C, member 3 isofor...
ABCC3                 0.005   ATP-binding cassette, sub-family C, member 3 isoform ...
TPM1                  0.005   tropomyosin 1 alpha chain isoform 6 
TPM1                  0.005   tropomyosin 1 alpha chain isoform 2 
TPM1                  0.005   tropomyosin 1 alpha chain isoform 1 
TPM1                  0.005   tropomyosin 1 alpha chain isoform 3 
LOC283767             0.005   golgi autoantigen, golgin subfamily a-like 
LOC400352             0.005   PREDICTED: similar to Putative golgin subfamily A m...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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