Guide to the Human Genome
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Name: EPRS Sequence: fasta or formatted (1512aa) NCBI GI: 62241042
Description:

glutamyl-prolyl tRNA synthetase

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3        110           2
 C cysteine            1.9         28           2
 D aspartate           5.1         77           2
 E glutamate           8.7        132           2
 F phenylalanine       3.3         50           2
 G glycine             5.8         87           3
 H histidine           2.1         31           2
 I isoleucine          5.2         79           2
 K lysine              9.8        148           4
 L leucine             7.9        119           2
 M methionine          1.9         29           1
 N asparagine          4.2         63           3
 P proline             5.4         81           2
 Q glutamine           4.3         65           2
 R arginine            3.9         59           3
 S serine              5.9         89           3
 T threonine           5.5         83           3
 V valine              7.1        107           2
 W tryptophan          1.8         27           1
 Y tyrosine            3.2         48           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamyl-prolyl tRNA synthetase 
QARS                  0.075   glutaminyl-tRNA synthetase 
EARS2                 0.013   glutamyl-tRNA synthetase 2 
WARS                  0.012   tryptophanyl-tRNA synthetase isoform a 
WARS                  0.012   tryptophanyl-tRNA synthetase isoform a 
EIF5B                 0.008   eukaryotic translation initiation factor 5B 
SSRP1                 0.007   structure specific recognition protein 1 
MARS                  0.007   methionyl-tRNA synthetase 
EEF1E1                0.007   eukaryotic translation elongation factor 1 epsilon 1 ...
RSF1                  0.007   remodeling and spacing factor 1 
NEFH                  0.007   neurofilament, heavy polypeptide 200kDa 
SFRS18                0.006   splicing factor, arginine/serine-rich 130 
SFRS18                0.006   splicing factor, arginine/serine-rich 130 
MAP1B                 0.006   microtubule-associated protein 1B 
NEFM                  0.006   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.006   neurofilament, medium polypeptide 150kDa isoform 2 ...
EEF1E1                0.006   eukaryotic translation elongation factor 1 epsilon ...
RBBP6                 0.006   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.006   retinoblastoma-binding protein 6 isoform 1 
PNN                   0.005   pinin, desmosome associated protein 
NASP                  0.005   nuclear autoantigenic sperm protein isoform 2 
NASP                  0.005   nuclear autoantigenic sperm protein isoform 1 
SOX5                  0.005   SRY (sex determining region Y)-box 5 isoform b [Homo...
SOX5                  0.005   SRY (sex determining region Y)-box 5 isoform a [Homo...
GRIPAP1               0.005   GRIP1 associated protein 1 isoform 2 
ATRX                  0.005   transcriptional regulator ATRX isoform 2 
ATRX                  0.005   transcriptional regulator ATRX isoform 1 
TRDN                  0.005   triadin 
PTPRZ1                0.004   protein tyrosine phosphatase, receptor-type, zeta1 p...
MAP1A                 0.004   microtubule-associated protein 1A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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