TPM1 34421

Name: TPM1	Sequence: fasta or formatted (284aa)		NCBI GI: 63252896
Description: tropomyosin 1 alpha chain isoform 3		Referenced in: Muscle
Other entries for this name: alt prot [284aa] tropomyosin 1 alpha chain isoform 5 alt prot [284aa] tropomyosin 1 alpha chain isoform 1 alt prot [284aa] tropomyosin 1 alpha chain isoform 4 alt prot [284aa] tropomyosin 1 alpha chain isoform 2 alt prot [245aa] tropomyosin 1 alpha chain isoform 6 alt prot [284aa] tropomyosin 1 alpha chain isoform 7
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.3 35 2 C cysteine 0.4 1 1 D aspartate 7.7 22 2 E glutamate 20.1 57 3 F phenylalanine 0.4 1 1 G glycine 1.1 3 1 H histidine 1.1 3 1 I isoleucine 3.5 10 2 K lysine 13.0 37 3 L leucine 12.0 34 2 M methionine 2.8 8 1 N asparagine 2.5 7 2 P proline 0.0 0 0 Q glutamine 5.3 15 1 R arginine 5.3 15 2 S serine 4.9 14 1 T threonine 2.8 8 1 V valine 3.5 10 1 W tryptophan 0.0 0 0 Y tyrosine 1.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tropomyosin 1 alpha chain isoform 3 TPM1 0.941 tropomyosin 1 alpha chain isoform 4 TPM1 0.909 tropomyosin 1 alpha chain isoform 1 TPM1 0.897 tropomyosin 1 alpha chain isoform 2 TPM4 0.868 tropomyosin 4 isoform 1 TPM1 0.852 tropomyosin 1 alpha chain isoform 5 TPM1 0.838 tropomyosin 1 alpha chain isoform 7 TPM3 0.836 tropomyosin 3 isoform 1 TPM2 0.826 tropomyosin 2 (beta) isoform 2 TPM2 0.807 tropomyosin 2 (beta) isoform 1 TPM1 0.637 tropomyosin 1 alpha chain isoform 6 TPM3 0.629 tropomyosin 3 isoform 4 TPM4 0.629 tropomyosin 4 isoform 2 TPM3 0.590 tropomyosin 3 isoform 5 TPM3 0.588 tropomyosin 3 isoform 2 TPM3 0.548 tropomyosin 3 isoform 3 TPM2 0.487 tropomyosin 2 (beta) isoform 3 LOC400352 0.124 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.124 PREDICTED: similar to Putative golgin subfamily A m... MYH9 0.116 myosin, heavy polypeptide 9, non-muscle LOC645202 0.116 PREDICTED: hypothetical protein LOC645202 LOC440243 0.116 PREDICTED: Putative golgin subfamily A member 6-lik... SMC1A 0.108 structural maintenance of chromosomes 1A ERC1 0.108 RAB6-interacting protein 2 isoform epsilon ERC1 0.108 RAB6-interacting protein 2 isoform delta LOC727832 0.108 golgi autoantigen, golgin subfamily a-like LOC283767 0.108 golgi autoantigen, golgin subfamily a-like MYH10 0.103 myosin, heavy polypeptide 10, non-muscle MYH11 0.103 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.103 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.