TPM1 34425

Name: TPM1	Sequence: fasta or formatted (245aa)		NCBI GI: 63252904
Description: tropomyosin 1 alpha chain isoform 6		Referenced in: Muscle
Other entries for this name: alt prot [284aa] tropomyosin 1 alpha chain isoform 5 alt prot [284aa] tropomyosin 1 alpha chain isoform 3 alt prot [284aa] tropomyosin 1 alpha chain isoform 1 alt prot [284aa] tropomyosin 1 alpha chain isoform 4 alt prot [284aa] tropomyosin 1 alpha chain isoform 2 alt prot [284aa] tropomyosin 1 alpha chain isoform 7
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.8 29 2 C cysteine 0.4 1 1 D aspartate 6.1 15 2 E glutamate 20.8 51 3 F phenylalanine 0.4 1 1 G glycine 1.6 4 1 H histidine 0.8 2 1 I isoleucine 4.1 10 2 K lysine 9.0 22 1 L leucine 11.8 29 1 M methionine 1.2 3 1 N asparagine 2.4 6 2 P proline 0.0 0 0 Q glutamine 6.1 15 2 R arginine 9.0 22 2 S serine 5.7 14 3 T threonine 3.3 8 1 V valine 3.7 9 1 W tryptophan 0.0 0 0 Y tyrosine 1.6 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tropomyosin 1 alpha chain isoform 6 TPM3 0.834 tropomyosin 3 isoform 5 TPM3 0.785 tropomyosin 3 isoform 4 TPM3 0.785 tropomyosin 3 isoform 3 TPM4 0.781 tropomyosin 4 isoform 2 TPM1 0.769 tropomyosin 1 alpha chain isoform 1 TPM1 0.746 tropomyosin 1 alpha chain isoform 3 TPM3 0.737 tropomyosin 3 isoform 2 TPM1 0.725 tropomyosin 1 alpha chain isoform 2 TPM3 0.721 tropomyosin 3 isoform 1 TPM1 0.700 tropomyosin 1 alpha chain isoform 5 TPM2 0.697 tropomyosin 2 (beta) isoform 1 TPM4 0.684 tropomyosin 4 isoform 1 TPM1 0.674 tropomyosin 1 alpha chain isoform 4 TPM1 0.654 tropomyosin 1 alpha chain isoform 7 TPM2 0.630 tropomyosin 2 (beta) isoform 2 TPM2 0.494 tropomyosin 2 (beta) isoform 3 LOC645202 0.120 PREDICTED: hypothetical protein LOC645202 DEF6 0.113 differentially expressed in FDCP 6 homolog LOC400352 0.109 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.109 PREDICTED: similar to Putative golgin subfamily A m... NUMA1 0.109 nuclear mitotic apparatus protein 1 LOC727832 0.104 golgi autoantigen, golgin subfamily a-like MYH9 0.102 myosin, heavy polypeptide 9, non-muscle MYH11 0.102 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.102 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.102 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.102 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... SMC2 0.102 structural maintenance of chromosomes 2 SMC2 0.102 structural maintenance of chromosomes 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.