TPM1 24439

Name: TPM1	Sequence: fasta or formatted (284aa)		NCBI GI: 27597085
Description: tropomyosin 1 alpha chain isoform 5		Referenced in: Muscle
Other entries for this name: alt prot [284aa] tropomyosin 1 alpha chain isoform 3 alt prot [284aa] tropomyosin 1 alpha chain isoform 1 alt prot [284aa] tropomyosin 1 alpha chain isoform 4 alt prot [284aa] tropomyosin 1 alpha chain isoform 2 alt prot [245aa] tropomyosin 1 alpha chain isoform 6 alt prot [284aa] tropomyosin 1 alpha chain isoform 7
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.7 36 2 C cysteine 0.0 0 0 D aspartate 9.2 26 2 E glutamate 18.7 53 3 F phenylalanine 0.4 1 1 G glycine 1.1 3 1 H histidine 0.7 2 1 I isoleucine 4.2 12 2 K lysine 12.7 36 3 L leucine 11.6 33 1 M methionine 3.2 9 1 N asparagine 1.1 3 1 P proline 0.0 0 0 Q glutamine 6.0 17 1 R arginine 6.0 17 2 S serine 4.9 14 1 T threonine 2.5 7 1 V valine 3.2 9 1 W tryptophan 0.0 0 0 Y tyrosine 2.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tropomyosin 1 alpha chain isoform 5 TPM1 0.939 tropomyosin 1 alpha chain isoform 1 TPM1 0.911 tropomyosin 1 alpha chain isoform 4 TPM3 0.872 tropomyosin 3 isoform 1 TPM1 0.854 tropomyosin 1 alpha chain isoform 3 TPM2 0.838 tropomyosin 2 (beta) isoform 1 TPM1 0.808 tropomyosin 1 alpha chain isoform 7 TPM2 0.792 tropomyosin 2 (beta) isoform 2 TPM4 0.779 tropomyosin 4 isoform 1 TPM1 0.751 tropomyosin 1 alpha chain isoform 2 TPM1 0.599 tropomyosin 1 alpha chain isoform 6 TPM3 0.577 tropomyosin 3 isoform 3 TPM3 0.573 tropomyosin 3 isoform 2 TPM3 0.549 tropomyosin 3 isoform 5 TPM3 0.543 tropomyosin 3 isoform 4 TPM4 0.540 tropomyosin 4 isoform 2 TPM2 0.453 tropomyosin 2 (beta) isoform 3 LOC400352 0.117 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.117 PREDICTED: similar to Putative golgin subfamily A m... LOC645202 0.113 PREDICTED: hypothetical protein LOC645202 LOC440243 0.109 PREDICTED: Putative golgin subfamily A member 6-lik... LOC727832 0.107 golgi autoantigen, golgin subfamily a-like MYH9 0.107 myosin, heavy polypeptide 9, non-muscle LOC100133220 0.107 PREDICTED: hypothetical protein LOC283685 0.107 PREDICTED: golgi autoantigen, golgin subfamily a-li... ERC1 0.103 RAB6-interacting protein 2 isoform epsilon ERC1 0.103 RAB6-interacting protein 2 isoform delta PMFBP1 0.103 polyamine modulated factor 1 binding protein 1 isof... PMFBP1 0.103 polyamine modulated factor 1 binding protein 1 isof... MYH11 0.103 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.