TPM1 34422

Name: TPM1	Sequence: fasta or formatted (284aa)		NCBI GI: 63252898
Description: tropomyosin 1 alpha chain isoform 1		Referenced in: Muscle
Other entries for this name: alt prot [284aa] tropomyosin 1 alpha chain isoform 5 alt prot [284aa] tropomyosin 1 alpha chain isoform 3 alt prot [284aa] tropomyosin 1 alpha chain isoform 4 alt prot [284aa] tropomyosin 1 alpha chain isoform 2 alt prot [245aa] tropomyosin 1 alpha chain isoform 6 alt prot [284aa] tropomyosin 1 alpha chain isoform 7
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.7 36 2 C cysteine 0.4 1 1 D aspartate 8.5 24 2 E glutamate 19.7 56 3 F phenylalanine 0.4 1 1 G glycine 1.1 3 1 H histidine 0.7 2 1 I isoleucine 4.2 12 2 K lysine 13.4 38 3 L leucine 11.6 33 1 M methionine 2.1 6 1 N asparagine 1.8 5 2 P proline 0.0 0 0 Q glutamine 4.9 14 1 R arginine 5.3 15 2 S serine 5.3 15 1 T threonine 2.8 8 1 V valine 3.2 9 1 W tryptophan 0.0 0 0 Y tyrosine 2.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tropomyosin 1 alpha chain isoform 1 TPM1 0.937 tropomyosin 1 alpha chain isoform 5 TPM3 0.927 tropomyosin 3 isoform 1 TPM1 0.909 tropomyosin 1 alpha chain isoform 3 TPM2 0.880 tropomyosin 2 (beta) isoform 1 TPM1 0.850 tropomyosin 1 alpha chain isoform 4 TPM4 0.822 tropomyosin 4 isoform 1 TPM1 0.807 tropomyosin 1 alpha chain isoform 2 TPM2 0.771 tropomyosin 2 (beta) isoform 2 TPM1 0.748 tropomyosin 1 alpha chain isoform 7 TPM1 0.657 tropomyosin 1 alpha chain isoform 6 TPM3 0.604 tropomyosin 3 isoform 5 TPM3 0.596 tropomyosin 3 isoform 4 TPM4 0.584 tropomyosin 4 isoform 2 TPM3 0.562 tropomyosin 3 isoform 3 TPM3 0.554 tropomyosin 3 isoform 2 TPM2 0.430 tropomyosin 2 (beta) isoform 3 MYH9 0.116 myosin, heavy polypeptide 9, non-muscle LOC440243 0.116 PREDICTED: Putative golgin subfamily A member 6-lik... LOC645202 0.112 PREDICTED: hypothetical protein LOC645202 ERC1 0.108 RAB6-interacting protein 2 isoform epsilon ERC1 0.108 RAB6-interacting protein 2 isoform delta SMC1A 0.107 structural maintenance of chromosomes 1A MYH11 0.107 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.107 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.107 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.107 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... LOC100133220 0.103 PREDICTED: hypothetical protein MYH10 0.101 myosin, heavy polypeptide 10, non-muscle LOC727832 0.101 golgi autoantigen, golgin subfamily a-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.