TPM1 34423

Name: TPM1	Sequence: fasta or formatted (284aa)		NCBI GI: 63252900
Description: tropomyosin 1 alpha chain isoform 4		Referenced in: Muscle
Other entries for this name: alt prot [284aa] tropomyosin 1 alpha chain isoform 5 alt prot [284aa] tropomyosin 1 alpha chain isoform 3 alt prot [284aa] tropomyosin 1 alpha chain isoform 1 alt prot [284aa] tropomyosin 1 alpha chain isoform 2 alt prot [245aa] tropomyosin 1 alpha chain isoform 6 alt prot [284aa] tropomyosin 1 alpha chain isoform 7
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.3 35 2 C cysteine 0.0 0 0 D aspartate 8.5 24 2 E glutamate 19.0 54 3 F phenylalanine 0.4 1 1 G glycine 1.1 3 1 H histidine 1.1 3 1 I isoleucine 3.9 11 2 K lysine 12.3 35 3 L leucine 12.0 34 2 M methionine 3.5 10 1 N asparagine 1.8 5 2 P proline 0.0 0 0 Q glutamine 6.3 18 1 R arginine 6.0 17 2 S serine 4.6 13 1 T threonine 2.5 7 1 V valine 3.5 10 1 W tryptophan 0.0 0 0 Y tyrosine 1.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tropomyosin 1 alpha chain isoform 4 TPM1 0.943 tropomyosin 1 alpha chain isoform 3 TPM1 0.911 tropomyosin 1 alpha chain isoform 5 TPM1 0.897 tropomyosin 1 alpha chain isoform 7 TPM1 0.852 tropomyosin 1 alpha chain isoform 1 TPM2 0.850 tropomyosin 2 (beta) isoform 2 TPM1 0.840 tropomyosin 1 alpha chain isoform 2 TPM4 0.826 tropomyosin 4 isoform 1 TPM3 0.783 tropomyosin 3 isoform 1 TPM2 0.765 tropomyosin 2 (beta) isoform 1 TPM3 0.603 tropomyosin 3 isoform 2 TPM4 0.587 tropomyosin 4 isoform 2 TPM1 0.577 tropomyosin 1 alpha chain isoform 6 TPM3 0.575 tropomyosin 3 isoform 4 TPM3 0.563 tropomyosin 3 isoform 3 TPM3 0.536 tropomyosin 3 isoform 5 TPM2 0.510 tropomyosin 2 (beta) isoform 3 LOC400352 0.117 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.117 PREDICTED: similar to Putative golgin subfamily A m... LOC645202 0.115 PREDICTED: hypothetical protein LOC645202 LOC440243 0.111 PREDICTED: Putative golgin subfamily A member 6-lik... LOC727832 0.107 golgi autoantigen, golgin subfamily a-like LOC283767 0.107 golgi autoantigen, golgin subfamily a-like LOC100133220 0.107 PREDICTED: hypothetical protein MYH9 0.107 myosin, heavy polypeptide 9, non-muscle LOC283685 0.107 PREDICTED: golgi autoantigen, golgin subfamily a-li... PMFBP1 0.107 polyamine modulated factor 1 binding protein 1 isof... PMFBP1 0.107 polyamine modulated factor 1 binding protein 1 isof... ERC1 0.103 RAB6-interacting protein 2 isoform epsilon ERC1 0.103 RAB6-interacting protein 2 isoform delta Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.