TPM1 34424

Name: TPM1	Sequence: fasta or formatted (284aa)		NCBI GI: 63252902
Description: tropomyosin 1 alpha chain isoform 2		Referenced in: Muscle
Other entries for this name: alt prot [284aa] tropomyosin 1 alpha chain isoform 5 alt prot [284aa] tropomyosin 1 alpha chain isoform 3 alt prot [284aa] tropomyosin 1 alpha chain isoform 1 alt prot [284aa] tropomyosin 1 alpha chain isoform 4 alt prot [245aa] tropomyosin 1 alpha chain isoform 6 alt prot [284aa] tropomyosin 1 alpha chain isoform 7
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.7 39 3 C cysteine 0.4 1 1 D aspartate 7.4 21 2 E glutamate 20.8 59 3 F phenylalanine 0.4 1 1 G glycine 0.7 2 1 H histidine 1.4 4 1 I isoleucine 3.9 11 2 K lysine 11.6 33 3 L leucine 11.6 33 2 M methionine 2.8 8 1 N asparagine 2.5 7 2 P proline 0.0 0 0 Q glutamine 4.6 13 1 R arginine 6.3 18 2 S serine 4.9 14 1 T threonine 2.1 6 1 V valine 3.9 11 1 W tryptophan 0.0 0 0 Y tyrosine 1.1 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tropomyosin 1 alpha chain isoform 2 TPM1 0.939 tropomyosin 1 alpha chain isoform 7 TPM1 0.901 tropomyosin 1 alpha chain isoform 3 TPM1 0.842 tropomyosin 1 alpha chain isoform 4 TPM1 0.810 tropomyosin 1 alpha chain isoform 1 TPM4 0.788 tropomyosin 4 isoform 1 TPM3 0.756 tropomyosin 3 isoform 1 TPM2 0.756 tropomyosin 2 (beta) isoform 2 TPM1 0.752 tropomyosin 1 alpha chain isoform 5 TPM2 0.737 tropomyosin 2 (beta) isoform 1 TPM3 0.630 tropomyosin 3 isoform 4 TPM1 0.622 tropomyosin 1 alpha chain isoform 6 TPM4 0.620 tropomyosin 4 isoform 2 TPM3 0.590 tropomyosin 3 isoform 5 TPM3 0.588 tropomyosin 3 isoform 2 TPM3 0.549 tropomyosin 3 isoform 3 TPM2 0.505 tropomyosin 2 (beta) isoform 3 MYH9 0.131 myosin, heavy polypeptide 9, non-muscle LOC645202 0.121 PREDICTED: hypothetical protein LOC645202 LOC440243 0.115 PREDICTED: Putative golgin subfamily A member 6-lik... MYH11 0.115 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.115 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.115 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.115 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... LOC400352 0.113 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.113 PREDICTED: similar to Putative golgin subfamily A m... KIF20B 0.111 M-phase phosphoprotein 1 MYH10 0.109 myosin, heavy polypeptide 10, non-muscle DEF6 0.107 differentially expressed in FDCP 6 homolog SMC1A 0.105 structural maintenance of chromosomes 1A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.