CCDC41 352

Name: CCDC41	Sequence: fasta or formatted (701aa)		NCBI GI: 109134347
Description: NY-REN-58 antigen		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt mRNA [701aa] NY-REN-58 antigen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 39 2 C cysteine 0.4 3 1 D aspartate 3.3 23 1 E glutamate 16.3 114 2 F phenylalanine 2.0 14 1 G glycine 1.6 11 2 H histidine 2.6 18 2 I isoleucine 3.6 25 1 K lysine 10.6 74 2 L leucine 13.3 93 3 M methionine 2.0 14 1 N asparagine 5.0 35 2 P proline 2.0 14 2 Q glutamine 9.0 63 3 R arginine 7.0 49 2 S serine 5.6 39 3 T threonine 3.9 27 2 V valine 4.7 33 2 W tryptophan 0.3 2 1 Y tyrosine 1.6 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NY-REN-58 antigen CCDC41 1.000 NY-REN-58 antigen MYH10 0.076 myosin, heavy polypeptide 10, non-muscle CCDC88A 0.074 coiled-coil domain containing 88A isoform 1 CCDC88A 0.074 coiled-coil domain containing 88A isoform 2 MYH11 0.070 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.070 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.070 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.070 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH7 0.069 myosin, heavy chain 7, cardiac muscle, beta CENPE 0.069 centromere protein E MYH8 0.068 myosin, heavy chain 8, skeletal muscle, perinatal [... CENPF 0.067 centromere protein F TPR 0.067 nuclear pore complex-associated protein TPR CCDC88C 0.067 DVL-binding protein DAPLE ROCK2 0.067 Rho-associated, coiled-coil containing protein kinas... EEA1 0.066 early endosome antigen 1, 162kD MYH2 0.066 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.066 myosin, heavy chain 2, skeletal muscle, adult [Homo... CGNL1 0.066 cingulin-like 1 LOC727832 0.065 golgi autoantigen, golgin subfamily a-like MYH3 0.065 myosin, heavy chain 3, skeletal muscle, embryonic [H... TCHH 0.064 trichohyalin LOC283767 0.063 golgi autoantigen, golgin subfamily a-like PLEC1 0.063 plectin 1 isoform 11 PLEC1 0.063 plectin 1 isoform 10 PLEC1 0.063 plectin 1 isoform 8 PLEC1 0.063 plectin 1 isoform 7 PLEC1 0.063 plectin 1 isoform 6 PLEC1 0.063 plectin 1 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.