Guide to the Human Genome
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Name: KIF3C Sequence: fasta or formatted (793aa) NCBI GI: 41352705
Description:

kinesin family member 3C

Referenced in:

Kinesins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         63           2
 C cysteine            0.5          4           1
 D aspartate           4.0         32           2
 E glutamate          10.6         84           3
 F phenylalanine       2.1         17           1
 G glycine             6.2         49           8
 H histidine           2.1         17           1
 I isoleucine          4.2         33           2
 K lysine              7.6         60           2
 L leucine             9.2         73           2
 M methionine          3.0         24           2
 N asparagine          4.2         33           4
 P proline             5.0         40           3
 Q glutamine           5.7         45           2
 R arginine            7.6         60           2
 S serine              7.3         58           3
 T threonine           4.8         38           2
 V valine              4.9         39           2
 W tryptophan          0.5          4           1
 Y tyrosine            2.5         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin family member 3C 
KIF3B                 0.574   kinesin family member 3B 
KIF3A                 0.353   kinesin family member 3A 
KIF17                 0.267   kinesin family member 17 isoform b 
KIF17                 0.267   kinesin family member 17 isoform a 
KIF11                 0.183   kinesin family member 11 
KIF15                 0.169   kinesin family member 15 
KIF1C                 0.163   kinesin family member 1C 
KIF27                 0.158   kinesin family member 27 
KIF4B                 0.158   kinesin family member 4B 
KIF4A                 0.157   kinesin family member 4 
KIF16B                0.156   kinesin-like motor protein C20orf23 
KIF13B                0.154   kinesin family member 13B 
KIF1B                 0.153   kinesin family member 1B isoform alpha 
KIF1B                 0.153   kinesin family member 1B isoform b 
KIF1A                 0.152   axonal transport of synaptic vesicles 
KIF7                  0.149   kinesin family member 7 
KIF13A                0.145   kinesin family member 13A isoform d 
KIF13A                0.145   kinesin family member 13A isoform c 
KIF13A                0.145   kinesin family member 13A isoform b 
KIF13A                0.145   kinesin family member 13A isoform a 
KIF5A                 0.143   kinesin family member 5A 
CENPE                 0.142   centromere protein E 
KIF21A                0.142   kinesin family member 21A 
KIF14                 0.142   kinesin family member 14 
KIF5B                 0.141   kinesin family member 5B 
KIF18A                0.139   kinesin family member 18A 
KIF21B                0.139   kinesin family member 21B 
KIF5C                 0.139   kinesin family member 5C 
KIF19                 0.136   kinesin family member 19 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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